RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 DNAJB12Q9NXW2 375 aaKnown RBP12.27□□□□□ -0.45
HDAC1-206ENST00000476391 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 YIPF1Q9Y548 306 aa12.27□□□□□ -0.45
HDAC1-206ENST00000476391 GOLGA4Q13439 2230 aaKnown RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 CACNA1CQ13936 2221 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 KIF26BQ2KJY2 2108 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 FANCMQ8IYD8 2048 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 A0A1B0GU03 582 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 C4orf47A7E2U8 309 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 TCF21O43680 179 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 PNPP00491 289 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 IFNA21P01568 189 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 RPS27P42677 84 aaKnown RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 NOVA1P51513 510 aaKnown RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 NTHL1P78549 312 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 COL10A1Q03692 680 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 UNC119Q13432 240 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 SMAD4Q13485 552 aaKnown RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 ENPP2Q13822 863 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 TMEM176BQ3YBM2 270 aaPredicted RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 TPGS2Q68CL5 300 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 LRRC69Q6ZNQ3 347 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 VN1R2Q8NFZ6 395 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 SLC26A10Q8NG04 563 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 OR5L2Q8NGL0 311 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 PADI1Q9ULC6 663 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 HIF3AQ9Y2N7 669 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 LIPGQ9Y5X9 500 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 CA11O75493 328 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 IRF2P14316 349 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 FOXF1Q12946 379 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 TAF9Q16594 264 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 EMC4Q5J8M3 183 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 FAM78AQ5JUQ0 283 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 SLC8B1Q6J4K2 584 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 ZNF761Q86XN6 746 aaPredicted RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
HDAC1-206ENST00000476391 RAB42Q8N4Z0 105 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 LINC01555Q8NAE3 123 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 OSGIN2Q9Y236 505 aa12.26□□□□□ -0.45
HDAC1-206ENST00000476391 DNAH12Q6ZR08 3092 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 TCRBV21S2A2A0A5A6 115 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 BPNT1O95861 308 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 TIMP1P01033 207 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 QRFPP83859 136 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 FZD2Q14332 565 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 TRMT12Q53H54 448 aaKnown RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 FHL5Q5TD97 284 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 C1orf189Q5VU69 101 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 TXNDC8Q6A555 127 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 PLXDC2Q6UX71 529 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 RTN4RL1Q86UN2 441 aaPredicted RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 OR5H2Q8NGV7 314 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 CTDSP1Q9GZU7 261 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 HHLA2Q9UM44 414 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 B3GALT5Q9Y2C3 310 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 POLR3KQ9Y2Y1 108 aaPredicted RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 MED19A0JLT2 244 aaPredicted RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 ZNF860A6NHJ4 632 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 GLRA1P23415 457 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 OR10J1P30954 320 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 GRK6P43250 576 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 BTG2P78543 158 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 OR5I1Q13606 314 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 SP5Q6BEB4 398 aaPredicted RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 CATSPERDQ86XM0 798 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 LRRC75AQ8NAA5 344 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 OR2A1Q8NGT9 310 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 RBMXL1Q96E39 390 aaKnown RBP12.25□□□□□ -0.45
HDAC1-206ENST00000476391 SCN2AQ99250 2005 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 LPAR4Q99677 370 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 CNTD2Q9H8S5 307 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 FBLN5Q9UBX5 448 aa12.25□□□□□ -0.45
HDAC1-206ENST00000476391 ETV2O00321 342 aaPredicted RBP12.24□□□□□ -0.45
HDAC1-206ENST00000476391 RENP00797 406 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 CSF2RAP15509 400 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 GPR1P46091 355 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 EMDP50402 254 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 CTXN1P60606 82 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 ROM1Q03395 351 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 LCN10Q6JVE6 187 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 PPP1R14AQ96A00 147 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
HDAC1-206ENST00000476391 DNAJC4Q9NNZ3 241 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 FKBP11Q9NYL4 201 aa12.24□□□□□ -0.45
HDAC1-206ENST00000476391 A8MXE2 369 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 K7ESM1 405 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 GPR3P46089 330 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 SP3Q02447 781 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
HDAC1-206ENST00000476391 SGCGQ13326 291 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 KCNMB1Q16558 191 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 ALG10Q5BKT4 473 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 RTL10Q7L3V2 364 aa12.23□□□□□ -0.45
HDAC1-206ENST00000476391 TGIF2LYQ8IUE0 185 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms