RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 IGHV4-59P01825 116 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 MUC1P15941 1255 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-203ENST00000430038 ALOX5APP20292 161 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 BPIFB3P59826 476 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 MICBQ29980 383 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 FAM76BQ5HYJ3 339 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 METTL11BQ5VVY1 283 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 STUMQ69YW2 141 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 VMO1Q7Z5L0 202 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 AQP12AQ8IXF9 295 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 SCCPDHQ8NBX0 429 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 SLC7A6OSQ96CW6 309 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-203ENST00000430038 LRGUKQ96M69 825 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 TRIM36Q9NQ86 728 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 DNAJB11Q9UBS4 358 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 LRP12Q9Y561 859 aa14.06□□□□□ -0.16
CPSF4-203ENST00000430038 CCDC182A6NF36 153 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 AKR7A2O43488 359 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 RHBDL1O75783 438 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 CST4P01036 141 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 IKZF1Q13422 519 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 GK3PQ14409 553 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 CDONQ4KMG0 1287 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 ATPAF1Q5TC12 328 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-203ENST00000430038 BCDIN3DQ7Z5W3 292 aaKnown RBP14.05□□□□□ -0.16
CPSF4-203ENST00000430038 PNKDQ8N490 385 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 PIGCQ92535 297 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 RAB3IPQ96QF0 476 aaPredicted RBP14.05□□□□□ -0.16
CPSF4-203ENST00000430038 PKP2Q99959 881 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 SP140LQ9H930 580 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 HAO2Q9NYQ3 351 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 COPS3Q9UNS2 423 aa14.05□□□□□ -0.16
CPSF4-203ENST00000430038 TCRBV3S1A0A5B6 114 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 RNASEK-C17orf49H0YIS7 233 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 GNGT2O14610 69 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 PRODHO43272 600 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 ECDO95905 644 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-203ENST00000430038 APOC1P02654 83 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 IER3P46695 156 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 MZT1Q08AG7 82 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 KLRD1Q13241 179 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 PDCD1Q15116 288 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 DGUOKQ16854 277 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 KRT74Q7RTS7 529 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-203ENST00000430038 PAPD5Q8NDF8 572 aaKnown RBP14.04□□□□□ -0.16
CPSF4-203ENST00000430038 CSNK2A3Q8NEV1 391 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 WFDC12Q8WWY7 111 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 TNFRSF14Q92956 283 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 GAFA1Q96PS6 74 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 DCTN5Q9BTE1 182 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 TTTY10Q9BZA0 68 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 SLC25A19Q9HC21 320 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 SIRT7Q9NRC8 400 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 FAM206AQ9NX38 181 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 NOTCH1P46531 2555 aa14.04□□□□□ -0.16
CPSF4-203ENST00000430038 A0A1W2PRD5 423 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 A0A1W2PRF3 423 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 A0A1W2PRM7 423 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 M0R129 80 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 MAGEB4O15481 346 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-203ENST00000430038 FKBP6O75344 327 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 TIPRLO75663 272 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 MRPL3P09001 348 aaKnown RBP14.03□□□□□ -0.16
CPSF4-203ENST00000430038 PAICSP22234 425 aaKnown RBP14.03□□□□□ -0.16
CPSF4-203ENST00000430038 GNALP38405 381 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 DAPP51397 102 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 RAG2P55895 527 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 PSMA6P60900 246 aaKnown RBP14.03□□□□□ -0.16
CPSF4-203ENST00000430038 CBX1P83916 185 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 APOFQ13790 326 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 TREML4Q6UXN2 200 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 ZNF788Q6ZQV5 615 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 TRPM8Q7Z2W7 1104 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 ZNF454Q8N9F8 522 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 ANGPTL6Q8NI99 470 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 RNF170Q96K19 258 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 FAM71F1Q96KD3 344 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-203ENST00000430038 TEAD3Q99594 435 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 MICU1Q9BPX6 476 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 RGCCQ9H4X1 137 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 ELL3Q9HB65 397 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-203ENST00000430038 ONECUT1Q9UBC0 465 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 ZNF391Q9UJN7 358 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 POMPQ9Y244 141 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 MPC1Q9Y5U8 109 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 KPTNQ9Y664 436 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 TGP01266 2768 aa14.03□□□□□ -0.16
CPSF4-203ENST00000430038 PRKDCP78527 4128 aaKnown RBP14.02□□□□□ -0.17
CPSF4-203ENST00000430038 IGKV1D-17A0A075B6S4 117 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 PRKYO43930 277 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 GPR137BO60478 399 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 NDUFA7O95182 113 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 IGLV3-1P01715 115 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 HMGN1P05114 100 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 CFL1P23528 166 aaKnown RBP14.02□□□□□ -0.17
CPSF4-203ENST00000430038 EPHA2P29317 976 aa14.02□□□□□ -0.17
CPSF4-203ENST00000430038 GPM6AP51674 278 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms