RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ALDH3B1P43353 468 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ADORA2A-AS1P86434 159 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF774Q6NX45 483 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 MTFR2Q6P444 385 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 TFAP2EQ6VUC0 442 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 PAQR4Q8N4S7 273 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 CHST5Q9GZS9 411 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 OR10A2Q9H208 303 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 HRASLSQ9HDD0 168 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 TAS2R8Q9NYW2 309 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 UPB1Q9UBR1 384 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 RAB22AQ9UL26 194 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ALG5Q9Y673 324 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 UBR5O95071 2799 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 TMEM14DPA8MWL7 114 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 MTRF1O75570 445 aaKnown RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF93P35789 620 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 OR3A2P47893 321 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 SLC6A9P48067 706 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 HGFACQ04756 655 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 UNC119Q13432 240 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 RNASE12Q5GAN4 147 aaKnown RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 CRIP3Q6Q6R5 217 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 SLC16A14Q7RTX9 510 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 OR2W3Q7Z3T1 314 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 FGFBP3Q8TAT2 258 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ST6GAL2Q96JF0 529 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 CACNG6Q9BXT2 260 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 OPN3Q9H1Y3 402 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 SCPEP1Q9HB40 452 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 PLSCR4Q9NRQ2 329 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 PRSS50Q9UI38 385 aa13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ERRFI1Q9UJM3 462 aaPredicted RBP13.11□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF587BE7ETH6 402 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 CCNKO75909 580 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 SCGNO76038 276 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 IL18BPO95998 194 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 GSK3AP49840 483 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 SNAI3Q3KNW1 292 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 BTN2A1Q7KYR7 527 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 LIX1LQ8IVB5 337 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 ATG5Q9H1Y0 275 aa13.1□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF107Q9UII5 783 aaPredicted RBP13.1□□□□□ -0.31
SCAF11-204ENST00000395454 SPTBN1Q01082 2364 aaKnown RBP13.1□□□□□ -0.31
SCAF11-204ENST00000395454 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 CGAP01215 116 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 VSIG8P0DPA2 414 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 COX5BP10606 129 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 PTHLHP12272 177 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 GIFP27352 417 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 CHRNB4P30926 498 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 EIF2B2P49770 351 aaKnown RBP13.09□□□□□ -0.31
SCAF11-204ENST00000395454 COLCA1Q6ZS62 124 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 ZNF610Q8N9Z0 462 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 RAB27BO00194 218 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 ZG16O60844 167 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 MT-ND4P03905 459 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 UBBP0CG47 229 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 PRSS3P35030 304 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
SCAF11-204ENST00000395454 FAPQ12884 760 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 TMEM255AQ5JRV8 349 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 FBXW9Q5XUX1 488 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 RELL2Q8NC24 303 aaPredicted RBP13.09□□□□□ -0.31
SCAF11-204ENST00000395454 CA5BP1Q8WTZ4 195 aa13.09□□□□□ -0.31
SCAF11-204ENST00000395454 METTL21EPA6NDL7 271 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 GMDSO60547 372 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 RBBP9O75884 186 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 LPLP06858 475 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 CSF1P09603 554 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 PLA2G2AP14555 144 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 HTR5AP47898 357 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 C9orf135Q5VTT2 229 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 TMEM42Q69YG0 159 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 OR56B4Q8NH76 319 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 AKR7LQ8NHP1 331 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 AQP3Q92482 292 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 SPSB4Q96A44 273 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 GHITMQ9H3K2 345 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 PIGMQ9H3S5 423 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 GHRLQ9UBU3 117 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 N6AMT1Q9Y5N5 214 aa13.08□□□□□ -0.32
SCAF11-204ENST00000395454 WIPF3A6NGB9 483 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 FAM90A27PA6NNH2 459 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 MSTNO14793 375 aa13.07□□□□□ -0.32
SCAF11-204ENST00000395454 DHFRP00374 187 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms