RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 NRIP2Q9BQI9 281 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 HRH4Q9H3N8 390 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 PNRC2Q9NPJ4 139 aaKnown RBP18.18■□□□□ 0.5
CLK3-202ENST00000395066 OR5AC2Q9NZP5 309 aa18.18■□□□□ 0.5
CLK3-202ENST00000395066 CEP192Q8TEP8 1941 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 A0A1W2PNV4 684 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 MEX3AA1L020 520 aaKnown RBP18.17■□□□□ 0.5
CLK3-202ENST00000395066 NPIPB13A6NJU9 1138 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 NPIPB4C9JG80 1138 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 GDF9O60383 454 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 FARS2O95363 451 aaKnown RBP18.17■□□□□ 0.5
CLK3-202ENST00000395066 SRFP11831 508 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 DHPSP49366 369 aaPredicted RBP18.17■□□□□ 0.5
CLK3-202ENST00000395066 CPNE2Q96FN4 548 aaPredicted RBP18.17■□□□□ 0.5
CLK3-202ENST00000395066 MTCH2Q9Y6C9 303 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 PRSS44E7EML9 344 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 SCGNO76038 276 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 GPR85P60893 370 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 ANKRD55Q3KP44 614 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 TMEM176BQ3YBM2 270 aaPredicted RBP18.17■□□□□ 0.5
CLK3-202ENST00000395066 OR51F2Q8NH61 342 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 ZNF576Q9H609 170 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 RHOFQ9HBH0 211 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 SDHAF3Q9NRP4 125 aa18.17■□□□□ 0.5
CLK3-202ENST00000395066 RCC2Q9P258 522 aaKnown RBP18.17■□□□□ 0.5
CLK3-202ENST00000395066 SUPT4H1P63272 117 aaKnown RBP18.16■□□□□ 0.5
CLK3-202ENST00000395066 SFT2D1Q8WV19 159 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 WIF1Q9Y5W5 379 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 IFNA4P05014 189 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 MUC1P15941 1255 aaPredicted RBP18.16■□□□□ 0.5
CLK3-202ENST00000395066 GLRA1P23415 457 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 SLC6A9P48067 706 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 PRSS54Q6PEW0 395 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 FOXRED2Q8IWF2 684 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 NUBPLQ8TB37 319 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 OR10C1Q96KK4 312 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 OR2S2Q9NQN1 319 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 GPR132Q9UNW8 380 aa18.16■□□□□ 0.5
CLK3-202ENST00000395066 ADAMTS9Q9P2N4 1935 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 SUMO3P55854 103 aaPredicted RBP18.15■□□□□ 0.5
CLK3-202ENST00000395066 CADM4Q8NFZ8 388 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 OR13G1Q8NGZ3 307 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 MRGPRX4Q96LA9 322 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 TGIF2Q9GZN2 237 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 MYOTQ9UBF9 498 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 IGHV3-15A0A0B4J1V0 119 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 SCRG1O75711 98 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 CELA2AP08217 269 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 AMY2BP19961 511 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 GSK3AP49840 483 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 CAV2P51636 162 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 PRSS12P56730 875 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 SKA3Q8IX90 412 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 KCNG3Q8TAE7 436 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 ADAMTS17Q8TE56 1095 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 RTBDNQ9BSG5 229 aaPredicted RBP18.15■□□□□ 0.5
CLK3-202ENST00000395066 RAB18Q9NP72 206 aa18.15■□□□□ 0.5
CLK3-202ENST00000395066 CELSR3Q9NYQ7 3312 aa18.14■□□□□ 0.5
CLK3-202ENST00000395066 F5H5K5 113 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 LYL1P12980 280 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 ZNF43P17038 809 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 SLC25A47Q6Q0C1 308 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 OR51T1Q8NGJ9 327 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 OR5H2Q8NGV7 314 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 SAT2Q96F10 170 aaPredicted RBP18.14■□□□□ 0.49
CLK3-202ENST00000395066 SEMA5BQ9P283 1151 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 SRPK3Q9UPE1 567 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 MBTPS2O43462 519 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 SFT2D2O95562 160 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 CHRM2P08172 466 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 SERPINA2P20848 420 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 CLDN17P56750 224 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 GALNTL5Q7Z4T8 443 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 SMIM8Q96KF7 97 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 LYZL4Q96KX0 146 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 AQP10Q96PS8 301 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 NUDT16L1Q9BRJ7 211 aaKnown RBP18.14■□□□□ 0.49
CLK3-202ENST00000395066 FSCN3Q9NQT6 498 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 GSKIPQ9P0R6 139 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 FLVCR1Q9Y5Y0 555 aa18.14■□□□□ 0.49
CLK3-202ENST00000395066 MFNGO00587 321 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 BCAT2O15382 392 aaPredicted RBP18.13■□□□□ 0.49
CLK3-202ENST00000395066 SWI5Q1ZZU3 235 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 CRIP3Q6Q6R5 217 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 LRRC18Q8N456 261 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 HOXB5P09067 269 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 PEA15Q15121 130 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 PHYHD1Q5SRE7 291 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 AADACL3Q5VUY0 350 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 GUSBP11Q6P575 273 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 WDR74Q6RFH5 385 aaPredicted RBP18.13■□□□□ 0.49
CLK3-202ENST00000395066 WDSUB1Q8N9V3 476 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 OR2M3Q8NG83 312 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 CRB3Q9BUF7 120 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 METTL8Q9H825 291 aaKnown RBP18.13■□□□□ 0.49
CLK3-202ENST00000395066 ELL3Q9HB65 397 aaPredicted RBP18.13■□□□□ 0.49
CLK3-202ENST00000395066 FBLN5Q9UBX5 448 aa18.13■□□□□ 0.49
CLK3-202ENST00000395066 IGLV3-12A0A075B6K2 115 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 G3V3Y1 287 aa18.12■□□□□ 0.49
CLK3-202ENST00000395066 STMND1H3BQB6 276 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms