RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PNPP00491 289 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 IL2RAP01589 272 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 S100A8P05109 93 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 SMIM6P0DI80 62 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 GLI4P10075 376 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 SSTR2P30874 369 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 GDI2P50395 445 aaKnown RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 MMP16P51512 607 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 ZP1P60852 638 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 SSTP61278 116 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 PCBD1P61457 104 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 GRB2P62993 217 aaKnown RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 MRPS10P82664 201 aaKnown RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 HLXQ14774 488 aaPredicted RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 KLHL24Q6TFL4 600 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF600Q6ZNG1 722 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 RPRMLQ8N4K4 120 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 OR2G2Q8NGZ5 317 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 C4orf45Q96LM5 186 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 METTL17Q9H7H0 456 aaPredicted RBP11.14□□□□□ -0.63
DDX39A-202ENST00000324340 CENPMQ9NSP4 180 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 R4GMQ9 66 aa11.14□□□□□ -0.63
DDX39A-202ENST00000324340 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 ZFPL1O95159 310 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 LPLP06858 475 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 TMIGD3P0DMS9 266 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 CD8BP10966 210 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 OTX1P32242 354 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 THBS2P35442 1172 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 SEC61A1P61619 476 aaKnown RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 RPS11P62280 158 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 SLC3A1Q07837 685 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 MFGE8Q08431 387 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 KLF9Q13886 244 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 LY6DQ14210 128 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 RAB35Q15286 201 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 MPPED2Q15777 294 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 WDR38Q5JTN6 314 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 SLC16A14Q7RTX9 510 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 DPPA2Q7Z7J5 298 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 CATSPERDQ86XM0 798 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 PRSS35Q8N3Z0 413 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 CNEP1R1Q8N9A8 125 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 NAXEQ8NCW5 288 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 ST6GALNAC3Q8NDV1 305 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 OR1K1Q8NGR3 316 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 C15orf40Q8WUR7 153 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 MRPS24Q96EL2 167 aaKnown RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 SEC22CQ9BRL7 303 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 TMED9Q9BVK6 235 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 SFXN3Q9BWM7 321 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 NKX6-2Q9C056 277 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 G6PC2Q9NQR9 355 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 FAM206AQ9NX38 181 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 MLXQ9UH92 298 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 MRPS7Q9Y2R9 242 aaKnown RBP11.13□□□□□ -0.63
DDX39A-202ENST00000324340 TIMM10BQ9Y5J6 103 aa11.13□□□□□ -0.63
DDX39A-202ENST00000324340 LAMA5O15230 3695 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 TMEM269A0A1B0GVZ9 245 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 OR6C6A6NF89 314 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 SYNGR3O43761 229 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 LANCL1O43813 399 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 SERPINA3P01011 423 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 UBBP0CG47 229 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 UBCP0CG48 685 aaKnown RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 ZNF32P17041 273 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 CXCL2P19875 107 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 PSMB1P20618 241 aaKnown RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 COX5AP20674 150 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 IGHV1-2P23083 117 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 GIFP27352 417 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 KIR3DL2P43630 455 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 PSMA6P60900 246 aaKnown RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 GMFBP60983 142 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 RPS27AP62979 156 aaKnown RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 UBA52P62987 128 aaKnown RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 ECH1Q13011 328 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 SNTB2Q13425 540 aaKnown RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 KRTAP27-1Q3LI81 207 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 GABRG1Q8N1C3 465 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 DMBX1Q8NFW5 382 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 OR5AK2Q8NH90 309 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 ABHD4Q8TB40 342 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 BCL2L2Q92843 193 aaPredicted RBP11.12□□□□□ -0.63
DDX39A-202ENST00000324340 ELMOD3Q96FG2 381 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 PDCD1LG2Q9BQ51 273 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 TCEAL7Q9BRU2 100 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 OR2H1Q9GZK4 316 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 MOB1AQ9H8S9 216 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 PIPOXQ9P0Z9 390 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
DDX39A-202ENST00000324340 PROCRQ9UNN8 238 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms