RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C6orf203Q9P0P8 240 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 MGAT4BQ9UQ53 548 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF443Q9Y2A4 671 aaPredicted RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMED7Q9Y3B3 224 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 FLVCR1Q9Y5Y0 555 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 MALRD1Q5VYJ5 2156 aa2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 SONP18583 2426 aaKnown RBP2.92□□□□□ -1.94
CKS1BP3-201ENST00000600888 JMJD1CQ15652 2540 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ABCA2Q9BZC7 2435 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TRAV18A0A075B6X5 111 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 A0A087WZ39 114 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 IGHV3-15A0A0B4J1V0 119 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM72A0PK05 275 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRORSD1PA6NEY8 169 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 DPRXA6NFQ7 191 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR6C65A6NJZ3 312 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 A8MVM7 634 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 EVPLLA8MZ36 301 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PRSS46E5RG02 174 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 FTCDNL1E5RQL4 147 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TLX2O43763 284 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR2T1O43869 369 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 FMO6PO60774 539 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 RAMP1O60894 148 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SMPD2O60906 423 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 MRPL33O75394 65 aaKnown RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 NPPAP01160 153 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PNMTP11086 282 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 GGT1P19440 569 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 IGHV1-2P23083 117 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 IL32P24001 234 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 CXCR1P25024 350 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 EDNRAP25101 427 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 P2RY4P51582 365 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 CLDN17P56750 224 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR2B6P58173 313 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 DSCR10P59022 87 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 COPZ1P61923 177 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 CDK6Q00534 326 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PAX8Q06710 450 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PPA1Q15181 289 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 GABRA6Q16445 453 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 FAM106AQ4KMX7 169 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 COQ5Q5HYK3 327 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF311Q5JNZ3 666 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PAGE3Q5JUK9 113 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 REEP3Q6NUK4 255 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ULK3Q6PHR2 472 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TRAT1Q6PIZ9 186 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 BHLHA15Q7RTS1 189 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ABHD12BQ7Z5M8 362 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 GPR141Q7Z602 305 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 NET1Q7Z628 596 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 BIVMQ86UB2 503 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC30A8Q8IWU4 369 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TIGD4Q8IY51 512 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZNF100Q8IYN0 542 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TMEM99Q8N816 258 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ZIC4Q8N9L1 334 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 WFDC11Q8NEX6 87 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ATP6V1C2Q8NEY4 427 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR9K2Q8NGE7 335 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 MFSD8Q8NHS3 518 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SETD6Q8TBK2 473 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 PNPT1Q8TCS8 783 aaKnown RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 DNAJA4Q8WW22 397 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC38A4Q969I6 547 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ST6GALNAC6Q969X2 333 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 APH1AQ96BI3 265 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 MUCL1Q96DR8 90 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 AURKBQ96GD4 344 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC41A3Q96GZ6 507 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 ANKRD27Q96NW4 1050 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 CCL19Q99731 98 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 RSPO3Q9BXY4 272 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 LINC00470Q9BZP3 86 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 OR11A1Q9GZK7 315 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 CACYBPQ9HB71 228 aaKnown RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 TAS2R16Q9NYV7 291 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 CCDC167Q9P0B6 97 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 VAPAQ9P0L0 249 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 LEF1Q9UJU2 399 aaPredicted RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 RASD1Q9Y272 281 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC9A8Q9Y2E8 581 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 NOSIPQ9Y314 301 aaKnown RBP2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 NDUFAF1Q9Y375 327 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 RNF115Q9Y4L5 304 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 SLC25A15Q9Y619 301 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 VPS13CQ709C8 3753 aa2.91□□□□□ -1.94
CKS1BP3-201ENST00000600888 DOCK11Q5JSL3 2073 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A087WUJ7 227 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARPC4-TTLL3A0A0A6YYG9 625 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A0B4J2E0 115 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A1B0GX12 115 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 HTR3EA5X5Y0 456 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 C5orf52A6NGY3 159 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 SHISA9B4DS77 424 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 C5orf58C9J3I9 102 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 RPL36A-HNRNPH2H7BZ11 118 aa2.9□□□□□ -1.95
CKS1BP3-201ENST00000600888 K7EQD1 137 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms