RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	PPP1R3E	Q9H7J1	279 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	C1orf123	Q9NWV4	160 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	MIOX	Q9UGB7	285 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	NUFIP1	Q9UHK0	495 aa	Known RBP	11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	MRM2	Q9UI43	246 aa	Known RBP	11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	MPC1	Q9Y5U8	109 aa		11.28	□□□□□ -0.6
ARHGEF1-222	ENST00000600517	TRAPPC2L	H3BP13	241 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MAGEB4	O15481	346 aa	Predicted RBP	11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SRSF10	O75494	262 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	LHB	P01229	141 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	IGLV3-1	P01715	115 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR2T7	P0C7T2	308 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MAP2K3	P46734	347 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SEC61A1	P61619	476 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SNRPG	P62308	76 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	IL5RA	Q01344	420 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OCLN	Q16625	522 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZNF684	Q5T5D7	378 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZNF826P	Q6ZT77	177 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	WDR86	Q86TI4	376 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TEX29	Q8N6K0	151 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR1M1	Q8NGA1	313 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR2T27	Q8NH04	317 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	FAM81A	Q8TBF8	368 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PPP1R14A	Q96A00	147 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ITPKC	Q96DU7	683 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PAPOLG	Q9BWT3	736 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TTTY10	Q9BZA0	68 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	C7orf69	Q9H7B7	122 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	RNPEPL1	Q9HAU8	725 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	IMPAD1	Q9NX62	359 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	LRCH1	Q9Y2L9	728 aa		11.27	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ANXA2P2	A6NMY6	339 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZNF850	A8MQ14	1090 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	LGALS8	O00214	317 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TNFRSF13B	O14836	293 aa	Predicted RBP	11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ENTPD6	O75354	484 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ATP6V1B1	P15313	513 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	RPS2	P15880	293 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PSMB10	P40306	273 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PRDX4	Q13162	271 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ESCO2	Q56NI9	601 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	FAM76B	Q5HYJ3	339 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	LYPD2	Q6UXB3	125 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	DCDC5	Q6ZRR9	648 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZBTB49	Q6ZSB9	765 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	GCSAM	Q8N6F7	178 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	DEFB108B	Q8NET1	73 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR51E1	Q8TCB6	317 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR5P3	Q8WZ94	311 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PIGC	Q92535	297 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	NEIL1	Q96FI4	390 aa	Predicted RBP	11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MBOAT4	Q96T53	435 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MICU1	Q9BPX6	476 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TLNRD1	Q9H1K6	362 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ABCB9	Q9NP78	766 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	GPR84	Q9NQS5	396 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MMP26	Q9NRE1	261 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OPN4	Q9UHM6	478 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	METRN	Q9UJH8	293 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517		R4GMQ9	66 aa		11.26	□□□□□ -0.61
ARHGEF1-222	ENST00000600517		A0A1W2PQL4	384 aa	Predicted RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	METTL15	A6NJ78	407 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517		A6NLC8	198 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	LOC110117498-PIK3R3	F6TDL0	507 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PHF1	O43189	567 aa	Predicted RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	NDUFA2	O43678	99 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SULT1C4	O75897	302 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TTR	P02766	147 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	KRT8	P05787	483 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ATP6V1E1	P36543	226 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	CFHR2	P36980	270 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MTNR1A	P48039	350 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	HOXA4	Q00056	320 aa	Predicted RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	PAX2	Q02962	417 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MFGE8	Q08431	387 aa	Predicted RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZNF154	Q13106	437 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	KCNJ8	Q15842	424 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZBTB37	Q5TC79	503 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MEDAG	Q5VYS4	303 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ZNF841	Q6ZN19	808 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	NLRC3	Q7RTR2	1065 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SSX6	Q7RTT6	188 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	ELMOD2	Q8IZ81	293 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	BOLL	Q8N9W6	283 aa	Known RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	C19orf18	Q8NEA5	215 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SEMA6D	Q8NFY4	1073 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR8B3	Q8NGG8	313 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	HIST1H2AA	Q96QV6	131 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR8B2	Q96RD0	313 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TBX5	Q99593	518 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	RTL8A	Q9BWD3	113 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	METTL17	Q9H7H0	456 aa	Predicted RBP	11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	MOB1A	Q9H8S9	216 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	TRIM36	Q9NQ86	728 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	OR52A1	Q9UKL2	312 aa		11.25	□□□□□ -0.61
ARHGEF1-222	ENST00000600517	INSIG2	Q9Y5U4	225 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms