RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 WDR25Q64LD2 544 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 RHOUQ7L0Q8 258 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 PRSS45Q7RTY3 260 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 KRT77Q7Z794 578 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 BCL6BQ8N143 479 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 TCEANCQ8N8B7 351 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 DUX5Q96PT3 197 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 IL4I1Q96RQ9 567 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 ESM1Q9NQ30 184 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 TRIM36Q9NQ86 728 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 ZNF319Q9P2F9 582 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
NPLOC4-213ENST00000573519 IGHV3OR15-7A0A075B7D8 119 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 KIR2DS1A0A191URI9 304 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 ANXA2P2A6NMY6 339 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 ZAR1LA6NP61 321 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 PSMD9O00233 223 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 PHYHO14832 338 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 IGHV4-38-2P0DP08 117 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 PSMB10P40306 273 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 PAX2Q02962 417 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 C12orf73Q69YU5 71 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF841Q6ZN19 808 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 KCTD8Q6ZWB6 473 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 FTMTQ8N4E7 242 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 ZDHHC22Q8N966 263 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 CSNK2A3Q8NEV1 391 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 LRRC29Q8WV35 223 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 TEAD3Q99594 435 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 TTTY10Q9BZA0 68 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 RASSF4Q9H2L5 321 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 RIBC2Q9H4K1 309 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 RGCCQ9H4X1 137 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 PPP1R3EQ9H7J1 279 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 RHBDD3Q9Y3P4 386 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 LRP12Q9Y561 859 aa10.58□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF850A8MQ14 1090 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 ENSAO43768 121 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 EGR1P18146 543 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 ALOX5APP20292 161 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 NPY4RP50391 375 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 PSMA6P60900 246 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 GMFBP60983 142 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 FGF12P61328 243 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 UBA52P62987 128 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 CSNK2BP67870 215 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 EFNB1P98172 346 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 BAMBIQ13145 260 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 PRDX4Q13162 271 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 SNCBQ16143 134 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 LCN1P1Q5VSP4 162 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 KCTD18Q6PI47 426 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 WDR86Q86TI4 376 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 COMMD2Q86X83 199 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 FAM90A1Q86YD7 464 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 OR1M1Q8NGA1 313 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 OR8B12Q8NGG6 310 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 PIGCQ92535 297 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 MICU1Q9BPX6 476 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 PCGF1Q9BSM1 259 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 RTL8AQ9BWD3 113 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 PRRG3Q9BZD7 231 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 COPS3Q9UNS2 423 aa10.57□□□□□ -0.72
NPLOC4-213ENST00000573519 ARHGAP32A7KAX9 2087 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 DNAJC9-AS1A6NH13 148 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 PRR32B1ATL7 298 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 C22orf46C9J442 243 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 CDIPTO14735 213 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 TMPRSS2O15393 492 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 NDUFA2O43678 99 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 PPIAL4GP0DN37 164 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 CFPP27918 469 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 IL5RAQ01344 420 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 AADACL4Q5VUY2 407 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 ZFP1Q6P2D0 407 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 BRD3OSQ6XYD6 125 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 MEPCEQ7L2J0 689 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 C11orf53Q8IXP5 236 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 C3orf56Q8N813 242 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 TMEM163Q8TC26 289 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 ST8SIA4Q92187 359 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 DACT3Q96B18 629 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 UPRTQ96BW1 309 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 LYZL4Q96KX0 146 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 ZNF48Q96MX3 618 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 RBM4BQ9BQ04 359 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 OSBPL10Q9BXB5 764 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 MROQ9BYG7 248 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 YIPF3Q9GZM5 350 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 NIPAL2Q9H841 368 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 RNPEPL1Q9HAU8 725 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 SMURF1Q9HCE7 757 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 H2AFY2Q9P0M6 372 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
NPLOC4-213ENST00000573519 GTF2A1LQ9UNN4 478 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms