RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 BATF3Q9NR55 127 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 TUBG2Q9NRH3 451 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 CENPMQ9NSP4 180 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 CGGBP1Q9UFW8 167 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-225ENST00000569245 ATPIF1Q9UII2 106 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 CDC42EP3Q9UKI2 254 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 LRP12Q9Y561 859 aa12.31□□□□□ -0.44
COMMD4-225ENST00000569245 ZSCAN5BA6NJL1 495 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 E9PI62 339 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 OGG1O15527 345 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 CD1AP06126 327 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 H2BFMP0C1H6 154 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 CPEP16870 476 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 IL2RGP31785 369 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 CRYBB2P43320 205 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 RGS6P49758 472 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 HFEQ30201 348 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 TMEM255AQ5JRV8 349 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 FAM209AQ5JX71 171 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 RPL22L1Q6P5R6 122 aaKnown RBP12.3□□□□□ -0.44
COMMD4-225ENST00000569245 SPATC1Q76KD6 591 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 SATL1Q86VE3 508 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-225ENST00000569245 RPS4Y2Q8TD47 263 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 CCL17Q92583 94 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 UFD1Q92890 307 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 ELMOD3Q96FG2 381 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 COQ7Q99807 217 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 ATF6BQ99941 703 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 SHARPINQ9H0F6 387 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 PTTG3PQ9NZH4 202 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 PURGQ9UJV8 347 aaKnown RBP12.3□□□□□ -0.44
COMMD4-225ENST00000569245 ZDHHC8Q9ULC8 765 aa12.3□□□□□ -0.44
COMMD4-225ENST00000569245 F5H5K5 113 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 CCRL2O00421 344 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 SRSF10O75494 262 aaKnown RBP12.29□□□□□ -0.44
COMMD4-225ENST00000569245 RP2O75695 350 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-225ENST00000569245 MMP16P51512 607 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 GTF2A1P52655 376 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-225ENST00000569245 CDK5R1Q15078 307 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 TAF13Q15543 124 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 KRTAP27-1Q3LI81 207 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 AVPI1Q5T686 147 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 DMKNQ6E0U4 476 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-225ENST00000569245 LINC01356Q8N9X3 169 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 APOBEC3DQ96AK3 386 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-225ENST00000569245 HAVCR1Q96D42 359 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 YIPF6Q96EC8 236 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 DIRC2Q96SL1 478 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 SOX7Q9BT81 388 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 TREM2Q9NZC2 230 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 SIRT4Q9Y6E7 314 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-225ENST00000569245 R4GMQ9 66 aa12.29□□□□□ -0.44
COMMD4-225ENST00000569245 DPPA5A6NC42 116 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 A6NHS1 94 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 KIAA1324LA8MWY0 1029 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 CLDN25C9JDP6 229 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 PLPP2O43688 288 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 RPP14O95059 124 aaKnown RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 IFNA2P01563 188 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 APOC1P02654 83 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 TNFSF4P23510 183 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 HSD11B1P28845 292 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 TGFBR2P37173 567 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 PSMB10P40306 273 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 CCR9P51686 369 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 TNFAIP6P98066 277 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 ALKBH1Q13686 389 aaKnown RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 HLXQ14774 488 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 SSX1Q16384 188 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-225ENST00000569245 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 OR2Z1Q8NG97 314 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 CLDND2Q8NHS1 167 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 SPTSSAQ969W0 71 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 TIMD4Q96H15 378 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 TMEM160Q9NX00 188 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 NDUFB11Q9NX14 153 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 NDUFA13Q9P0J0 144 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 LPAR3Q9UBY5 353 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 CACNG2Q9Y698 323 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 ABCA2Q9BZC7 2435 aa12.28□□□□□ -0.44
COMMD4-225ENST00000569245 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 TMEM269A0A1B0GVZ9 245 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 ACOD1A6NK06 481 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 J3QW42 95 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 WNT9BO14905 357 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 PNPP00491 289 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 RAC2P15153 192 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 CD36P16671 472 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 CELP19835 753 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 HNF1AP20823 631 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 KITLGP21583 273 aa12.27□□□□□ -0.45
COMMD4-225ENST00000569245 NANOS3P60323 173 aaKnown RBP12.27□□□□□ -0.45
COMMD4-225ENST00000569245 PSMA6P60900 246 aaKnown RBP12.27□□□□□ -0.45
COMMD4-225ENST00000569245 FAM120AOSQ5T036 256 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms