RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 Q499Y3 187 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 PAMR1Q6UXH9 720 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 FBXW12Q6X9E4 464 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 TMEM91Q6ZNR0 172 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 ACBD4Q8NC06 268 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR51A4Q8NGJ6 313 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR1J1Q8NGS3 322 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR13C5Q8NGS8 318 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR14K1Q8NGZ2 314 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR10AC1Q8NH08 325 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR2AE1Q8NHA4 323 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 FAM222BQ8WU58 562 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 PLPPR2Q96GM1 343 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 RADILQ96JH8 1075 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 FAM71F1Q96KD3 344 aaPredicted RBP11.11□□□□□ -0.63
SPG7-209ENST00000564047 CCDC32Q9BV29 185 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
SPG7-209ENST00000564047 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 PTTG3PQ9NZH4 202 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 CRIM1Q9NZV1 1036 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 GSTK1Q9Y2Q3 226 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 V9GYS6 101 aa11.11□□□□□ -0.63
SPG7-209ENST00000564047 hCG_38984A0A1B0GV85 526 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 FUOMA2VDF0 154 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 ZNF879B4DU55 563 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 PRSS44E7EML9 344 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 ABCD4O14678 606 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 DHRS3O75911 302 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 RAF1P04049 648 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 CD2P06729 351 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 MAPK3P27361 379 aaPredicted RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 GLRXP35754 106 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 RPS19P39019 145 aaKnown RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 FAM3AP98173 230 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 SPOCK1Q08629 439 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 GK2Q14410 553 aaPredicted RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 ZMAT1Q5H9K5 638 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 SPANXN2Q5MJ10 180 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 MRPL21Q7Z2W9 205 aaKnown RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 CEACAM19Q7Z692 300 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 LYSMD2Q8IV50 215 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 PARP16Q8N5Y8 322 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 OR13C3Q8NGS6 347 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 SLC25A40Q8TBP6 338 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 TSEN15Q8WW01 171 aaKnown RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 SLC25A46Q96AG3 418 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 C10orf35Q96D05 121 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 KCTD7Q96MP8 289 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 OR14A2Q96R54 314 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 SOX7Q9BT81 388 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 POFUT1Q9H488 388 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 ZNF275Q9NSD4 429 aaPredicted RBP11.1□□□□□ -0.63
SPG7-209ENST00000564047 ITGB1BP2Q9UKP3 347 aa11.1□□□□□ -0.63
SPG7-209ENST00000564047 ABCA2Q9BZC7 2435 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 TRBV5-7A0A0A0MS05 114 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 DEFB108AA8MXU0 73 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 ARL6IP5O75915 188 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 CD3EP07766 207 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 RAC2P15153 192 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 DDOSTP39656 456 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 MAP2K3P46734 347 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 SOX2P48431 317 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 GSK3AP49840 483 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 ERVS71-1P61550 626 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 RPS23P62266 143 aaKnown RBP11.09□□□□□ -0.63
SPG7-209ENST00000564047 INSL4Q14641 139 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 OR8B8Q15620 311 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 ZNF718Q3SXZ3 478 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 SEMA6DQ8NFY4 1073 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 TMEM106AQ96A25 262 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 TRMT61AQ96FX7 289 aaKnown RBP11.09□□□□□ -0.63
SPG7-209ENST00000564047 MARS2Q96GW9 593 aaKnown RBP11.09□□□□□ -0.63
SPG7-209ENST00000564047 CEP19Q96LK0 163 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 SLC30A2Q9BRI3 323 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 OR2J1Q9GZK6 312 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 CACNA1CQ13936 2221 aa11.09□□□□□ -0.63
SPG7-209ENST00000564047 H3BSH0 61 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 PIN1P1O15428 100 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 SIAH2O43255 324 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 CDRT1O95170 752 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 PTTG1O95997 202 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 UCHL1P09936 223 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 SELEP16581 610 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 LOXP28300 417 aaPredicted RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 MAGEB1P43366 347 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 RIPPLY1Q0D2K3 151 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 TNK1Q13470 666 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 HLXQ14774 488 aaPredicted RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 DAZAP2Q15038 168 aaPredicted RBP11.08□□□□□ -0.64
SPG7-209ENST00000564047 SPATA46Q5T0L3 261 aa11.08□□□□□ -0.64
SPG7-209ENST00000564047 ZBTB37Q5TC79 503 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 571.5 ms