RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LDLRAD4O15165 306 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 CTAG2O75638 210 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 TNFSF13O75888 250 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 CCNOP22674 350 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 ANOS1P23352 680 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 CDK2P24941 298 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 TDGF1P3P51864 188 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 TAS2R20P59543 309 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 FOXF2Q12947 444 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 C1QTNF12Q5T7M4 302 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 RTL6Q6ICC9 239 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 RAB12Q6IQ22 244 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 GFRALQ6UXV0 394 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 MRPL21Q7Z2W9 205 aaKnown RBP11.96□□□□□ -0.49
TPM1-215ENST00000558868 OR2W3Q7Z3T1 314 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 GABRG1Q8N1C3 465 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 DTX3Q8N9I9 347 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 Q8NA96 180 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 OR2AE1Q8NHA4 323 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 SMIM4Q8WVI0 70 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 FCAMRQ8WWV6 532 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 STARD4Q96DR4 205 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 NOX3Q9HBY0 568 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 EIF3KQ9UBQ5 218 aaKnown RBP11.96□□□□□ -0.49
TPM1-215ENST00000558868 MRPS28Q9Y2Q9 187 aaKnown RBP11.96□□□□□ -0.49
TPM1-215ENST00000558868 FAM215AQ9Y5M1 114 aa11.96□□□□□ -0.49
TPM1-215ENST00000558868 ACACAQ13085 2346 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 HECTD1Q9ULT8 2610 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 ZNF816-ZNF321PA0A0X1KG74 233 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 ZNF503-AS2A6NEH8 195 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 CENPXA8MT69 81 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 EEF1E1O43324 174 aaKnown RBP11.95□□□□□ -0.5
TPM1-215ENST00000558868 RAD51DO75771 328 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 LYZL6O75951 148 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 ECDO95905 644 aaPredicted RBP11.95□□□□□ -0.5
TPM1-215ENST00000558868 CGAP01215 116 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 FAM87AP0C7U9 286 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 GSTT2BP0CG30 244 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 EDN3P14138 238 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 CBR1P16152 277 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 CEACAM8P31997 349 aaPredicted RBP11.95□□□□□ -0.5
TPM1-215ENST00000558868 AP3S2P59780 193 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 FAM3AP98173 230 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 ZNF92Q03936 586 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 OR8B8Q15620 311 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 LINC00303Q3SY05 128 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 AWAT2Q6E213 333 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 SEM1Q6ZVN7 128 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 GDPD3Q7L5L3 318 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 ANGPTL5Q86XS5 388 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 FTMTQ8N4E7 242 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 CSNK2A3Q8NEV1 391 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 SLC30A7Q8NEW0 376 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 SSC4DQ8WTU2 575 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 PIGTQ969N2 578 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 FAM46BQ96A09 425 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 BBC3Q96PG8 261 aaPredicted RBP11.95□□□□□ -0.5
TPM1-215ENST00000558868 SLX1AQ9BQ83 275 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 C7orf50Q9BRJ6 194 aaKnown RBP11.95□□□□□ -0.5
TPM1-215ENST00000558868 CDH20Q9HBT6 801 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 KCNN3Q9UGI6 736 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 SLC7A11Q9UPY5 501 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 RHBDD3Q9Y3P4 386 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
TPM1-215ENST00000558868 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 IGKV1-9A0A0C4DH69 117 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 LINC00854A0A1B0GVQ3 168 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 GGT3PA6NGU5 568 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 NRASP01111 189 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 ALDH3B1P43353 468 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 PTH2RP49190 550 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 KISS1Q15726 138 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 UBE2V2Q15819 145 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 TMEM42Q69YG0 159 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
TPM1-215ENST00000558868 UNQ6126/PRO20091Q6UXV3 157 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 LHFPL2Q6ZUX7 228 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 ZNF584Q8IVC4 421 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 IZUMO1Q8IYV9 350 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 ZNF101Q8IZC7 436 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 TOMM5Q8N4H5 51 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 ZNF610Q8N9Z0 462 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 KCNG3Q8TAE7 436 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 ENKURQ8TC29 256 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 YIPF5Q969M3 257 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 S100A13Q99584 98 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
TPM1-215ENST00000558868 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
TPM1-215ENST00000558868 C11orf54Q9H0W9 315 aaPredicted RBP11.94□□□□□ -0.5
TPM1-215ENST00000558868 PIGMQ9H3S5 423 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 AMDHD2Q9Y303 409 aa11.94□□□□□ -0.5
TPM1-215ENST00000558868 SULT1C2O00338 296 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 PLA2G10O15496 165 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 LYRM1O43325 122 aa11.93□□□□□ -0.5
TPM1-215ENST00000558868 GMDSO60547 372 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms