RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CCNJQ5T5M9 372 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 LIPKQ5VXJ0 399 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 TIGD3Q6B0B8 471 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 MED27Q6P2C8 311 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 TMEM107Q6UX40 140 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 TFAP2EQ6VUC0 442 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 IL34Q6ZMJ4 242 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 RGS9BPQ6ZS82 235 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 GOLGA7Q7Z5G4 137 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CCDC91Q7Z6B0 441 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 RANBP3LQ86VV4 465 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CNTN4Q8IWV2 1026 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CTAGE3PQ8IX95 158 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 KIR2DL5AQ8N109 375 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ZNF615Q8N8J6 731 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 BBOF1Q8ND07 529 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 OR7G2Q8NG99 324 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 OR4K17Q8NGC6 315 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 OR5L2Q8NGL0 311 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CLHC1Q8NHS4 586 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 NUBPLQ8TB37 319 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ABHD3Q8WU67 409 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 PEX13Q92968 403 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ADIPOR1Q96A54 375 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 KCNA7Q96RP8 456 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 TBCDQ9BTW9 1192 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ANGPTL4Q9BY76 406 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 SRXN1Q9BYN0 137 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 PLA2G12AQ9BZM1 189 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 SHCBP1LQ9BZQ2 653 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 TSGA10Q9BZW7 698 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ACTR8Q9H981 624 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CALHM2Q9HA72 323 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CXorf21Q9HAI6 301 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 LPAR2Q9HBW0 351 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 EML4Q9HC35 981 aaKnown RBP1.98□□□□□ -2.09
SCFD1-219ENST00000556413 LYRM4Q9HD34 91 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 EXOSC3Q9NQT5 275 aaKnown RBP1.98□□□□□ -2.09
SCFD1-219ENST00000556413 GIN1Q9NXP7 522 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 MAT2BQ9NZL9 334 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ZNF629Q9UEG4 869 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ZNF337Q9Y3M9 751 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ASB4Q9Y574 426 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 TEX264Q9Y6I9 313 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 CSPG4Q6UVK1 2322 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 ZANQ9Y493 2812 aa1.98□□□□□ -2.09
SCFD1-219ENST00000556413 USF3Q68DE3 2245 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 A0A096LNT2 108 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TRBV7-9A0A0J9YWB2 115 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 A0A1W2PP18 115 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 DPRXA6NFQ7 191 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 LYNX1G3V0Z9 82 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 M0R1B8 84 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 PGRMC1O00264 195 aaKnown RBP1.97□□□□□ -2.09
SCFD1-219ENST00000556413 OR7A17O14581 309 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TP53I11O14683 189 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 IMPA2O14732 288 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 CD5LO43866 347 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 RCBTB2O95199 551 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 GOSR1O95249 250 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 GPR75O95800 540 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 PDYNP01213 254 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 CD8AP01732 235 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 SLC35E2BP0CK96 405 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 LYNX1P0DP58 116 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 SDC1P18827 310 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 IL10P22301 178 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 IL32P24001 234 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 IVDP26440 423 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 IL12BP29460 328 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 EVI2BP34910 448 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 CASP9P55211 416 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TGM3Q08188 693 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 FOXF1Q12946 379 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 EIF2B1Q14232 305 aaKnown RBP1.97□□□□□ -2.09
SCFD1-219ENST00000556413 MORF4L2Q15014 288 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 MPPED2Q15777 294 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TOMM34Q15785 309 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TMEM249Q2WGJ8 235 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 PGGHGQ32M88 737 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 CHRFAM7AQ494W8 412 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 ATP6AP1LQ52LC2 224 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 STEAP4Q687X5 459 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TTC19Q6DKK2 380 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-219ENST00000556413 OR52E8Q6IFG1 317 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 DLEU7Q6UYE1 221 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 HACD2Q6Y1H2 254 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 STAC2Q6ZMT1 411 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 MOB1BQ7L9L4 216 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 LRRC70Q7Z2Q7 622 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 TRPM8Q7Z2W7 1104 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 COMMD6Q7Z4G1 85 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 ADAMTSL2Q86TH1 951 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 PLCZ1Q86YW0 608 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 ST13P4Q8IZP2 240 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-219ENST00000556413 CLEC4FQ8N1N0 589 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 ZCCHC24Q8N2G6 241 aaKnown RBP1.97□□□□□ -2.09
SCFD1-219ENST00000556413 OR2M3Q8NG83 312 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 OR4K14Q8NGD5 310 aa1.97□□□□□ -2.09
SCFD1-219ENST00000556413 OR10D3Q8NH80 312 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms