RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RGCCQ9H4X1 137 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 RNPEPL1Q9HAU8 725 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 BEX1Q9HBH7 125 aa13.46□□□□□ -0.25
DDX55-212ENST00000544738 SOX21Q9Y651 276 aaPredicted RBP13.46□□□□□ -0.25
DDX55-212ENST00000544738 TRAV40A0A0B4J280 105 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 A0A1B0GUS0 222 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 hCG_1807616A0A1W2PRN6 198 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 DYNC1I1O14576 645 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 GYG2O15488 501 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 PRODHO43272 600 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 ADAM20O43506 726 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 TIPRLO75663 272 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 LYNP07948 512 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 GNALP38405 381 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 OPRL1P41146 370 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 ZNF121P58317 390 aaPredicted RBP13.45□□□□□ -0.26
DDX55-212ENST00000544738 FGF12P61328 243 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 FLOT2Q14254 428 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 FAM57BQ71RH2 274 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 PRSS45Q7RTY3 260 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 TRPM8Q7Z2W7 1104 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 TMEM179BQ7Z7N9 219 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 OTOSQ8NHW6 89 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 CITED1Q99966 193 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
DDX55-212ENST00000544738 IGHV3OR16-10A0A075B7F0 116 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 hCG_38984A0A1B0GV85 526 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 TNFRSF13BO14836 293 aaPredicted RBP13.44□□□□□ -0.26
DDX55-212ENST00000544738 LHBP01229 141 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 GSK3AP49840 483 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 CDK5Q00535 292 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 SLC35D3Q5M8T2 416 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 GPR157Q5UAW9 335 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 PLBD1Q6P4A8 553 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 ZNF826PQ6ZT77 177 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 SPATA24Q86W54 205 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 PNLDC1Q8NA58 520 aaKnown RBP13.44□□□□□ -0.26
DDX55-212ENST00000544738 THEM6Q8WUY1 208 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 PGAM5Q96HS1 289 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 BRD7Q9NPI1 651 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 DNAJC27Q9NZQ0 273 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 CTSZQ9UBR2 303 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 DNAJB9Q9UBS3 223 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
DDX55-212ENST00000544738 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 ZNF879B4DU55 563 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 C22orf46C9J442 243 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 ECDO95905 644 aaPredicted RBP13.43□□□□□ -0.26
DDX55-212ENST00000544738 CRYBA1P05813 215 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 MUC1P15941 1255 aaPredicted RBP13.43□□□□□ -0.26
DDX55-212ENST00000544738 NAA10P41227 235 aaPredicted RBP13.43□□□□□ -0.26
DDX55-212ENST00000544738 CBX1P83916 185 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 IL5RAQ01344 420 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 MICBQ29980 383 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 KLHL12Q53G59 568 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 TEX36Q5VZQ5 186 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 OLFML2AQ68BL7 652 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 ASPHD2Q6ICH7 369 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 FAM90A1Q86YD7 464 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 CPOQ8IVL8 374 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 OR1M1Q8NGA1 313 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 FAM110DQ8TAY7 271 aaPredicted RBP13.43□□□□□ -0.26
DDX55-212ENST00000544738 DNAJC9Q8WXX5 260 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 AMELYQ99218 206 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 PAPOLGQ9BWT3 736 aaKnown RBP13.43□□□□□ -0.26
DDX55-212ENST00000544738 ABCB9Q9NP78 766 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 KAAG1Q9UBP8 84 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 MPC1Q9Y5U8 109 aa13.43□□□□□ -0.26
DDX55-212ENST00000544738 ANXA2P2A6NMY6 339 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 P2RY10O00398 339 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 FKBP6O75344 327 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 GYPAP02724 150 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 PRKACGP22612 351 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 CFHR2P36980 270 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 RAG2P55895 527 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 GFOD2Q3B7J2 385 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 C11orf53Q8IXP5 236 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 GALNT4Q8N4A0 578 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 PAPD5Q8NDF8 572 aaKnown RBP13.42□□□□□ -0.26
DDX55-212ENST00000544738 BCAS4Q8TDM0 211 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 NRBF2Q96F24 287 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 MICU1Q9BPX6 476 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 PCGF1Q9BSM1 259 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 PRDM13Q9H4Q3 707 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX55-212ENST00000544738 ZNF319Q9P2F9 582 aa13.42□□□□□ -0.26
DDX55-212ENST00000544738 TCRBV3S1A0A5B6 114 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 SELENOFO60613 162 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 TOX4O94842 621 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 KRTAP10-3P60369 221 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
DDX55-212ENST00000544738 HOXA4Q00056 320 aaPredicted RBP13.41□□□□□ -0.26
DDX55-212ENST00000544738 METTL11BQ5VVY1 283 aa13.41□□□□□ -0.26
DDX55-212ENST00000544738 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
DDX55-212ENST00000544738 KRT77Q7Z794 578 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms