RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PSMB10P40306 273 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 PITPNBP48739 271 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 GNB2P62879 340 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 ROM1Q03395 351 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 DEGS2Q6QHC5 323 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF841Q6ZN19 808 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 NLRC3Q7RTR2 1065 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 SLC35F2Q8IXU6 374 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF679Q8IYX0 411 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 GCSAMQ8N6F7 178 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 CSNK2A3Q8NEV1 391 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 OR1M1Q8NGA1 313 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 OR8B3Q8NGG8 313 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 ASB17Q8WXJ9 295 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 PPP1R14AQ96A00 147 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 DACT3Q96B18 629 aaPredicted RBP10.76□□□□□ -0.69
HDAC1-209ENST00000484305 ITPKCQ96DU7 683 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 OR8B4Q96RC9 309 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 OR8B2Q96RD0 313 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 GABARAPL3Q9BY60 117 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 MROQ9BYG7 248 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 RIBC2Q9H4K1 309 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 AUP1Q9Y679 476 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 TMEM14AQ9Y6G1 99 aa10.76□□□□□ -0.69
HDAC1-209ENST00000484305 hCG_1807616A0A1W2PRN6 198 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 ACOD1A6NK06 481 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF850A8MQ14 1090 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 TNFRSF13BO14836 293 aaPredicted RBP10.75□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF254O75437 659 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 EGR1P18146 543 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 DCTDP32321 178 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 CXCR4P61073 352 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 CSNK2BP67870 215 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 PAX8Q06710 450 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 PRDX4Q13162 271 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 WDR25Q64LD2 544 aaPredicted RBP10.75□□□□□ -0.69
HDAC1-209ENST00000484305 RAB40AQ8WXH6 277 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 C22orf15Q8WYQ4 148 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 PIGCQ92535 297 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 SLC6A7Q99884 636 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 APOL4Q9BPW4 351 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 RBM4BQ9BQ04 359 aaKnown RBP10.75□□□□□ -0.69
HDAC1-209ENST00000484305 PBOV1Q9GZY1 135 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 HAO2Q9NYQ3 351 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 CTSZQ9UBR2 303 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 CLN8Q9UBY8 286 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF391Q9UJN7 358 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 IKZF2Q9UKS7 526 aa10.75□□□□□ -0.69
HDAC1-209ENST00000484305 IGHV3OR15-7A0A075B7D8 119 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 A0A0A6YYJ9 748 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 TRAV38-1A0A0B4J264 116 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 IGHV2-70DA0A0C4DH43 119 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 A0A0U1RQV5 110 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 OOEPA6NGQ2 149 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 PHYHO14832 338 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 SRSF10O75494 262 aaKnown RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 CST4P01036 141 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 ALPLP05186 524 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 RIDAP52758 137 aaKnown RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 IL5RAQ01344 420 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 MFGE8Q08431 387 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 POU4F2Q12837 409 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 SNCBQ16143 134 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 KLF17Q5JT82 389 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 WDR82Q6UXN9 313 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 FAM90A1Q86YD7 464 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 GID4Q8IVV7 300 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 GALNT4Q8N4A0 578 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 FTMTQ8N4E7 242 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 SEMA6DQ8NFY4 1073 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 OR51G2Q8NGK0 314 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 OR51E1Q8TCB6 317 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF418Q8TF45 676 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 LRRC29Q8WV35 223 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 OR5P3Q8WZ94 311 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 MICU1Q9BPX6 476 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 MRI1Q9BV20 369 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 FGF23Q9GZV9 251 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-209ENST00000484305 TLNRD1Q9H1K6 362 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 RNPEPL1Q9HAU8 725 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 CLN6Q9NWW5 311 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 MPC1Q9Y5U8 109 aa10.74□□□□□ -0.69
HDAC1-209ENST00000484305 ANXA2P2A6NMY6 339 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF670-ZNF695F2Z2N8 137 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 EBAG9O00559 213 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 CDIPTO14735 213 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ADAM20O43506 726 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 APOL3O95236 402 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 GYPAP02724 150 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 MAP2K3P46734 347 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 HILS1P60008 231 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ELF3P78545 371 aaPredicted RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 KCNJ8Q15842 424 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF829Q3KNS6 432 aaPredicted RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ARMCX4Q5H9R4 360 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 DMRTC1Q5HYR2 192 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ZFP1Q6P2D0 407 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms