RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 CDH26Q8IXH8 852 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SPICQ8N5J4 248 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MS4A15Q8N5U1 240 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PARP16Q8N5Y8 322 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SEMA6DQ8NFY4 1073 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OR10H4Q8NGA5 316 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OR5A2Q8NGI9 324 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OR52I1Q8NGK6 324 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OR2G2Q8NGZ5 317 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SPRYD4Q8WW59 207 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CYGBQ8WWM9 190 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SLC7A6Q92536 515 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PHYHIPQ92561 330 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 NRGNQ92686 78 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RAB1CQ92928 201 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MYDGFQ969H8 173 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SPSB1Q96BD6 273 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OTULINQ96BN8 352 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RAB39BQ96DA2 213 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RNFT2Q96EX2 444 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PELI1Q96FA3 418 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PGAM5Q96HS1 289 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SYT3Q9BQG1 590 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ALG8Q9BVK2 526 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CHST5Q9GZS9 411 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PBOV1Q9GZY1 135 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 NEK6Q9HC98 313 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 GCM1Q9NP62 436 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 DECR2Q9NUI1 292 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CHCHD3Q9NX63 227 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SCN3BQ9NY72 215 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RASL12Q9NYN1 266 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 DNAJC27Q9NZQ0 273 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 KAAG1Q9UBP8 84 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ENPP5Q9UJA9 477 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OR52A1Q9UKL2 312 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 IKZF2Q9UKS7 526 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 HHLA2Q9UM44 414 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 KLHDC2Q9Y2U9 406 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RRP15Q9Y3B9 282 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TPRKBQ9Y3C4 175 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 NPTNQ9Y639 398 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 A0A1B0GTI1 187 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 LRP5LA4QPB2 252 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 GGT3PA6NGU5 568 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 TRIM64BA6NI03 449 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CYSRT1A8MQ03 144 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 LILRA1O75019 489 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM127O75204 238 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 NCR1O76036 304 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 SERPINA3P01011 423 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 HPXP02790 462 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CDK1P06493 297 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ANXA2P07355 339 aaKnown RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 HTR1AP08908 422 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 GNAO1P09471 354 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CD37P11049 281 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CD99P14209 185 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FSTP19883 344 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 USF1P22415 310 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CRHBPP24387 322 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CFPP27918 469 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 GNALP38405 381 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MDH2P40926 338 aaKnown RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 PRKXP51817 358 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 GBX2P52951 348 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 AQP4P55087 323 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 WNT4P56705 351 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 GNG3P63215 75 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 TNFAIP6P98066 277 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 PAX5Q02548 391 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ST3GAL4Q11206 333 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 MAB21L1Q13394 359 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ALKBH1Q13686 389 aaKnown RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 IRF3Q14653 427 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CDK5R1Q15078 307 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 LRRC36Q1X8D7 754 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 YIF1BQ5BJH7 314 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 WDR38Q5JTN6 314 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 CLVS2Q5SYC1 327 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ATPAF1Q5TC12 328 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 DMKNQ6E0U4 476 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 OR2T2Q6IF00 324 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 LAIR2Q6ISS4 152 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ALKBH2Q6NS38 261 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 VHLLQ6RSH7 139 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 IZUMO2Q6UXV1 221 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 FAM57BQ71RH2 274 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF771Q7L3S4 317 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 SSX6Q7RTT6 188 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF573Q86YE8 665 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 Q8IYB0 196 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 ZDHHC23Q8IYP9 409 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 SAXO1Q8IYX7 474 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 KLHL36Q8N4N3 616 aa4.3□□□□□ -1.72
HDAC6-223ENST00000480525 YIPF7Q8N8F6 280 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms