RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 Q9N2J8 555 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 LHX9Q9NQ69 397 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 EXOSC3Q9NQT5 275 aaKnown RBP4.35□□□□□ -1.71
LRCH3-214ENST00000473177 PARP11Q9NR21 331 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 CA10Q9NS85 328 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 FAM212BQ9NTI7 297 aaPredicted RBP4.35□□□□□ -1.71
LRCH3-214ENST00000473177 ASF1BQ9NVP2 202 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 MRPL15Q9P015 296 aaKnown RBP4.35□□□□□ -1.71
LRCH3-214ENST00000473177 LPAR3Q9UBY5 353 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 PRODH2Q9UF12 536 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 APOBEC3BQ9UH17 382 aaKnown RBP4.35□□□□□ -1.71
LRCH3-214ENST00000473177 IKZF2Q9UKS7 526 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 GTF2A1LQ9UNN4 478 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 DHDHQ9UQ10 334 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 STRAPQ9Y3F4 350 aaKnown RBP4.35□□□□□ -1.71
LRCH3-214ENST00000473177 OR1A2Q9Y585 309 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 LRRK2Q5S007 2527 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 PLXNA2O75051 1894 aa4.35□□□□□ -1.71
LRCH3-214ENST00000473177 PCM1Q15154 2024 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 USP9YO00507 2555 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 A0A1B0GWA3 101 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 A0A1W2PPK0 400 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 BTBD17A6NE02 478 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 PRSS29PA6NIE9 313 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 A6NIZ1 184 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ZNF705EA8MWA4 302 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 RNASEK-C17orf49H0YIS7 233 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 UBE2CO00762 179 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CLDN4O14493 209 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ADAM10O14672 748 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 NUPL2O15504 423 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 NKX2-8O15522 239 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 FRS3O43559 492 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 DUX1O43812 170 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 PIP5K1CO60331 668 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OR10H2O60403 315 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 FADS1O60427 444 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 FCMRO60667 390 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 NKX2-2O95096 273 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 SIX6O95475 246 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 MT-ATP6P00846 226 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CST4P01036 141 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 IFNA10P01566 189 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 GAPDHP04406 335 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 HIST1H1CP16403 213 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ZNF20P17024 532 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 TCN2P20062 427 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 S1PR1P21453 382 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 GCSHP23434 173 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CRABP1P29762 137 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 APOBEC3AP31941 199 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 GALNSP34059 522 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 GABRA3P34903 492 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 DRD3P35462 400 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 POU3F4P49335 361 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 RIDAP52758 137 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 RAP1BP61224 184 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 RAP1AP62834 184 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CDK3Q00526 305 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 NHLH2Q02577 135 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ECH1Q13011 328 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 DHRS2Q13268 280 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 C1orf61Q13536 156 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 FZD2Q14332 565 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CNN3Q15417 329 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CDSNQ15517 529 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 SURF2Q15527 256 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 DUSP5Q16690 384 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 TMEM128Q5BJH2 165 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 TMEM255AQ5JRV8 349 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ZNF684Q5T5D7 378 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 FAM27D1Q5T7N8 215 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 LIPNQ5VXI9 398 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 PAPD4Q6PIY7 484 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 CORO6Q6QEF8 472 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OPN5Q6U736 354 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 PARS2Q7L3T8 475 aaKnown RBP4.34□□□□□ -1.71
LRCH3-214ENST00000473177 TMED4Q7Z7H5 227 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 LRRTM1Q86UE6 522 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OOSP2Q86WS3 158 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ANGPTL5Q86XS5 388 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ZNF547Q8IVP9 402 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 ZNF679Q8IYX0 411 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 SLC22A18ASQ8N1D0 253 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 C10orf53Q8N6V4 93 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 AVL9Q8NBF6 648 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 SLC16A11Q8NCK7 471 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 NPEPL1Q8NDH3 523 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 SDR9C7Q8NEX9 313 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OR4D9Q8NGE8 314 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OR5AP2Q8NGF4 316 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OR1J1Q8NGS3 322 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 OR2G2Q8NGZ5 317 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 DUSP19Q8WTR2 217 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 PPP1R1CQ8WVI7 109 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 LCN9Q8WX39 176 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 DCUN1D4Q92564 292 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 MCHR2Q969V1 340 aa4.34□□□□□ -1.71
LRCH3-214ENST00000473177 TMEM106AQ96A25 262 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms