RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 NAA10P41227 235 aaPredicted RBP17.2■□□□□ 0.34
SDC1-205ENST00000447124 GFOD2Q3B7J2 385 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 BRD3OSQ6XYD6 125 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.2■□□□□ 0.34
SDC1-205ENST00000447124 FGFRL1Q8N441 504 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 ZNF454Q8N9F8 522 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 LRRC29Q8WV35 223 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 SEH1LQ96EE3 360 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 FGF23Q9GZV9 251 aaPredicted RBP17.2■□□□□ 0.34
SDC1-205ENST00000447124 RNPEPL1Q9HAU8 725 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 SLC25A19Q9HC21 320 aa17.2■□□□□ 0.34
SDC1-205ENST00000447124 A0A1B0GW55 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.19■□□□□ 0.34
SDC1-205ENST00000447124 GSC2O15499 205 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 PRODHO43272 600 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DNAJC8O75937 253 aaPredicted RBP17.19■□□□□ 0.34
SDC1-205ENST00000447124 SFTPBP07988 381 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L2P0CJ85 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L3P0CJ86 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L4P0CJ87 422 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L5P0CJ88 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L6P0CJ89 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L7P0CJ90 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 MMP9P14780 707 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 AMY2BP19961 511 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 CFL1P23528 166 aaKnown RBP17.19■□□□□ 0.34
SDC1-205ENST00000447124 CFHR2P36980 270 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 MTNR1AP48039 350 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DEFB112Q30KQ8 113 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 SLC35D3Q5M8T2 416 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 CD276Q5ZPR3 534 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4L9Q6RFH8 374 aaPredicted RBP17.19■□□□□ 0.34
SDC1-205ENST00000447124 WDR82Q6UXN9 313 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 UTP4Q969X6 686 aaKnown RBP17.19■□□□□ 0.34
SDC1-205ENST00000447124 TBX15Q96SF7 602 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 CADM1Q9BY67 442 aaKnown RBP17.19■□□□□ 0.34
SDC1-205ENST00000447124 PRDM13Q9H4Q3 707 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 TVP23BQ9NYZ1 205 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 KAAG1Q9UBP8 84 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 DUX4Q9UBX2 424 aa17.19■□□□□ 0.34
SDC1-205ENST00000447124 ZNF879B4DU55 563 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 CLDN34H7C241 214 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 DVL1O14640 695 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 CDIPTO14735 213 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 RNASE1P07998 156 aaKnown RBP17.18■□□□□ 0.34
SDC1-205ENST00000447124 DAPP51397 102 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 CRISP1P54107 249 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 GALNT4Q8N4A0 578 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 CSNK2A3Q8NEV1 391 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 OR8B12Q8NGG6 310 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 ITPKCQ96DU7 683 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 NRBF2Q96F24 287 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 CCL13Q99616 98 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 PCGF1Q9BSM1 259 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 PAPOLGQ9BWT3 736 aaKnown RBP17.18■□□□□ 0.34
SDC1-205ENST00000447124 TLNRD1Q9H1K6 362 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 RGCCQ9H4X1 137 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 YY1AP1Q9H869 796 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 TRIM36Q9NQ86 728 aa17.18■□□□□ 0.34
SDC1-205ENST00000447124 CCDC182A6NF36 153 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 PRR32B1ATL7 298 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 TIPRLO75663 272 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 LIPFP07098 398 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 FOXL1Q12952 345 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 APOFQ13790 326 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 SNAPC1Q16533 368 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 RUSC1-AS1Q66K80 236 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 FAHD1Q6P587 224 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 BTN2A1Q7KYR7 527 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 TEAD3Q99594 435 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 SIRPDQ9H106 197 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 ZMAT3Q9HA38 289 aaKnown RBP17.17■□□□□ 0.34
SDC1-205ENST00000447124 PCDHGB1Q9Y5G3 927 aa17.17■□□□□ 0.34
SDC1-205ENST00000447124 CENPVL3A0A0U1RRI6 287 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 ZNF850A8MQ14 1090 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 CST4P01036 141 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 RPS7P62081 194 aaKnown RBP17.16■□□□□ 0.34
SDC1-205ENST00000447124 PRDX4Q13162 271 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 OR5P3Q8WZ94 311 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 WDFY2Q96P53 400 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 MICU1Q9BPX6 476 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 ZNF747Q9BV97 191 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 LRP12Q9Y561 859 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 MPC1Q9Y5U8 109 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 TRRAPQ9Y4A5 3859 aa17.16■□□□□ 0.34
SDC1-205ENST00000447124 MGAM2Q2M2H8 2515 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 PSMD9O00233 223 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 P2RY10O00398 339 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 TMPRSS2O15393 492 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 MITFO75030 526 aaPredicted RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 TOX4O94842 621 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 MUC1P15941 1255 aaPredicted RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 GNALP38405 381 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 PSMA6P60900 246 aaKnown RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 ARF6P62330 175 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 BNIP1Q12981 228 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 PTGES3Q15185 160 aaKnown RBP17.15■□□□□ 0.34
SDC1-205ENST00000447124 MICBQ29980 383 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 FAM76BQ5HYJ3 339 aa17.15■□□□□ 0.34
SDC1-205ENST00000447124 WDR38Q5JTN6 314 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms