RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, human

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-205	ENST00000424235	PARP8	Q8N3A8	854 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	PLPP7	Q8NBV4	271 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	CSNK2A3	Q8NEV1	391 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	OR5K1	Q8NHB7	308 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	LRRC29	Q8WV35	223 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	SGK3	Q96BR1	496 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	HIST1H2AA	Q96QV6	131 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	RTL8A	Q9BWD3	113 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	RGCC	Q9H4X1	137 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	SLC25A19	Q9HC21	320 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235	ZNF69	Q9UC07	566 aa		13.46	□□□□□ -0.25
SNHG17-205	ENST00000424235		A0A1B0GWJ7	208 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235		G3V2T6	193 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	WIPF1	O43516	503 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	IL5RA	Q01344	420 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	POU4F2	Q12837	409 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	BAMBI	Q13145	260 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	CD276	Q5ZPR3	534 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	WDR25	Q64LD2	544 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	KCTD18	Q6PI47	426 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	PQLC1	Q8N2U9	271 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	C3orf56	Q8N813	242 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	ST8SIA4	Q92187	359 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	PIGC	Q92535	297 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	SPSB4	Q96A44	273 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	NRBF2	Q96F24	287 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	PCGF1	Q9BSM1	259 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	MRO	Q9BYG7	248 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	KLHDC2	Q9Y2U9	406 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	RHBDD3	Q9Y3P4	386 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	LRP12	Q9Y561	859 aa		13.45	□□□□□ -0.26
SNHG17-205	ENST00000424235	ARHGAP32	A7KAX9	2087 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	hCG_38984	A0A1B0GV85	526 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	TMPRSS2	O15393	492 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	MTNR1A	P48039	350 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	NPY4R	P50391	375 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	HCCS	P53701	268 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	PSMA6	P60900	246 aa	Known RBP	13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	CSNK2B	P67870	215 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	MICB	Q29980	383 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	THAP5	Q7Z6K1	395 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	ZDHHC13	Q8IUH4	622 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	FAM216A	Q8WUB2	273 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	LRTOMT	Q8WZ04	291 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	ZDHHC16	Q969W1	377 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	CNN2	Q99439	309 aa	Known RBP	13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	PKP2	Q99959	881 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	NIPAL2	Q9H841	368 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	DNAJB11	Q9UBS4	358 aa		13.44	□□□□□ -0.26
SNHG17-205	ENST00000424235	ZNF850	A8MQ14	1090 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235		M0R129	80 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	NDUFA2	O43678	99 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	IGHV4-38-2	P0DP08	117 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	DAP	P51397	102 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	FGF12	P61328	243 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	ESRRG	P62508	458 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	SLC34A1	Q06495	639 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	PAX8	Q06710	450 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	PRDX4	Q13162	271 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	PTGES3	Q15185	160 aa	Known RBP	13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	ATP6AP1	Q15904	470 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	GPR157	Q5UAW9	335 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	RHOU	Q7L0Q8	258 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	BCL6B	Q8N143	479 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	OR1M1	Q8NGA1	313 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	OR8B12	Q8NGG6	310 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	YIPF3	Q9GZM5	350 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	RASSF4	Q9H2L5	321 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	ENOPH1	Q9UHY7	261 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	TMEM14A	Q9Y6G1	99 aa		13.43	□□□□□ -0.26
SNHG17-205	ENST00000424235	TMEM269	A0A1B0GVZ9	245 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	NKX6-3	A6NJ46	265 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	CDIPT	O14735	213 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	PRKY	O43930	277 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	MITF	O75030	526 aa	Predicted RBP	13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	FSTL3	O95633	263 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	FSHB	P01225	129 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	RIDA	P52758	137 aa	Known RBP	13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	UBA52	P62987	128 aa	Known RBP	13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	KLF17	Q5JT82	389 aa	Predicted RBP	13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	METTL11B	Q5VVY1	283 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	FAHD1	Q6P587	224 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	AMIGO2	Q86SJ2	522 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	ZDHHC23	Q8IYP9	409 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	TCEANC	Q8N8B7	351 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	PNLDC1	Q8NA58	520 aa	Known RBP	13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	RNF170	Q96K19	258 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	SEMA6A	Q9H2E6	1030 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	ABCB9	Q9NP78	766 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	TNFRSF19	Q9NS68	423 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	ZNF319	Q9P2F9	582 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	CTSZ	Q9UBR2	303 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	MPC1	Q9Y5U8	109 aa		13.42	□□□□□ -0.26
SNHG17-205	ENST00000424235	KIR2DS1	A0A191URI9	304 aa		13.41	□□□□□ -0.26
SNHG17-205	ENST00000424235	DNAJC9-AS1	A6NH13	148 aa		13.41	□□□□□ -0.26
SNHG17-205	ENST00000424235	C22orf46	C9J442	243 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms