RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 TEX36Q5VZQ5 186 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 FAHD1Q6P587 224 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 SPATC1Q76KD6 591 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 KRT74Q7RTS7 529 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 PNLDC1Q8NA58 520 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 OR5K1Q8NHB7 308 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ASB17Q8WXJ9 295 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 UTP4Q969X6 686 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 C12orf43Q96C57 262 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 ZMYND19Q96E35 227 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 PGAM5Q96HS1 289 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 TEAD3Q99594 435 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 MICU1Q9BPX6 476 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 NUDT16L1Q9BRJ7 211 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 MROQ9BYG7 248 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 C1orf123Q9NWV4 160 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 LAMP5Q9UJQ1 280 aa12.12□□□□□ -0.47
NIF3L1-205ENST00000409588 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 FAM181BA6NEQ2 426 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 A6NLC8 198 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 TMEM210A6NLX4 147 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 CST4P01036 141 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 ALOX5APP20292 161 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 SLC2A5P22732 501 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 PRTN3P24158 256 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 RPS7P62081 194 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 PTGES3Q15185 160 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 FAM76BQ5HYJ3 339 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 KRT77Q7Z794 578 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 ZDHHC22Q8N966 263 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 OR1M1Q8NGA1 313 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 HIST1H2AAQ96QV6 131 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 MNTQ99583 582 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 OSBPL10Q9BXB5 764 aa12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 CADM1Q9BY67 442 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 H2AFY2Q9P0M6 372 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-205ENST00000409588 A0A0U1RQV5 110 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 G3V2T6 193 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 PLATP00750 562 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 FCGR1AP12314 374 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 FASP25445 335 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 ROM1Q03395 351 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 FOXL1Q12952 345 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 FAM201AQ5SY85 155 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 LYPD2Q6UXB3 125 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 HS3ST5Q8IZT8 346 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 SLC25A28Q96A46 364 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 DUS3LQ96G46 650 aaKnown RBP12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 RTL8AQ9BWD3 113 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 DNTTIP1Q9H147 329 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 TLNRD1Q9H1K6 362 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 TVP23BQ9NYZ1 205 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF69Q9UC07 566 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 ARHGAP32A7KAX9 2087 aa12.1□□□□□ -0.47
NIF3L1-205ENST00000409588 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 C5orf63A6NC05 138 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 P2RY10O00398 339 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ADAM20O43506 726 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 MAP2K3P46734 347 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 DAPP51397 102 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 APOFQ13790 326 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ATP6AP1Q15904 470 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ATPAF1Q5TC12 328 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ZBTB37Q5TC79 503 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 SFRP4Q6FHJ7 346 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 SLC36A1Q7Z2H8 476 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF679Q8IYX0 411 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 SIGLECL1Q8N7X8 197 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 C3orf56Q8N813 242 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 AMELYQ99218 206 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 PAPOLGQ9BWT3 736 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 ZNF319Q9P2F9 582 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 RHBDD3Q9Y3P4 386 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 AP4S1Q9Y587 144 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 DOCK11Q5JSL3 2073 aa12.09□□□□□ -0.47
NIF3L1-205ENST00000409588 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 SLC22A31A6NKX4 558 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF879B4DU55 563 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 SELENOFO60613 162 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 CFPP27918 469 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 RBMXP38159 391 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 EFNB1P98172 346 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 BAMBIQ13145 260 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 HNRNPA0Q13151 305 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 PDCD1Q15116 288 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 GPR157Q5UAW9 335 aa12.08□□□□□ -0.48
NIF3L1-205ENST00000409588 TMEM236Q5W0B7 351 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms