RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 IGHV3-9P01782 118 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 EIF2S3P41091 472 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 GSK3AP49840 483 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 BIDP55957 195 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 EEF1A1P68104 462 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 TMEM268Q5VZI3 342 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TMEM151BQ8IW70 566 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 ZNF440Q8IYI8 595 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 ZNF321PQ8N8H1 164 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TMEM37Q8WXS4 190 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 IER2Q9BTL4 223 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 NUDT9Q9BW91 350 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 KLHL13Q9P2N7 655 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TNFSF18Q9UNG2 199 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 OR2M5A3KFT3 312 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 SLC17A2O00624 439 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 CLN5O75503 358 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 OR7C1O76099 320 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 SULT1A1P50225 295 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 RAG2P55895 527 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TGFBR3Q03167 851 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 VWA2Q5GFL6 755 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 PABPC1L2AQ5JQF8 200 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TMPRSS11FQ6ZWK6 438 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TIPARPQ7Z3E1 657 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 ZSCAN4Q8NAM6 433 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 ELSPBP1Q96BH3 223 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 GIMAP5Q96F15 307 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 SCARF2Q96GP6 870 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 LIN37Q96GY3 246 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 OR5B2Q96R09 309 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 GFI1Q99684 422 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 FAM212BQ9NTI7 297 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 KIF26AQ9ULI4 1882 aaPredicted RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 G3V3Q6 166 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 S100A8P05109 93 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 CRHP06850 196 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 HLA-DOBP13765 273 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 ADCYAP1P18509 176 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 RPL29P47914 159 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 TMEM33P57088 247 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 RPS11P62280 158 aaKnown RBP eCLIP7.89□□□□□ -1.15
RTN4-206ENST00000394611 RPL23AP62750 156 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 RPS21P63220 83 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 ZXDAP98168 799 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 ZNF528Q3MIS6 628 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TAAR8Q969N4 342 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 RPUSD4Q96CM3 377 aaKnown RBP7.89□□□□□ -1.15
RTN4-206ENST00000394611 MRGPRX3Q96LB0 322 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 C4orf45Q96LM5 186 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 TMPRSS5Q9H3S3 457 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 ADAM29Q9UKF5 820 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 R4GN57 208 aa7.89□□□□□ -1.15
RTN4-206ENST00000394611 CACNA1BQ00975 2339 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 MUC3AQ02505 3323 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 HCRTR1O43613 425 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 CELA2BP08218 269 aaPredicted RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 DUSP1P28562 367 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 SURF2Q15527 256 aaPredicted RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 BCORP1Q8N888 145 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 OR5D14Q8NGL3 314 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 LMX1AQ8TE12 382 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 RRNAD1Q96FB5 475 aaKnown RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 PIK3IP1Q96FE7 263 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 TCEAL7Q9BRU2 100 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 DNAJB12Q9NXW2 375 aaKnown RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 KCNS2Q9ULS6 477 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 MED13LQ71F56 2210 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 FREM2Q5SZK8 3169 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 TRAV34A0A0B4J273 112 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 A0A1W2PPQ1 181 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 OR4C45A6NMZ5 311 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 UTS2O95399 124 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 IGKV1D-16P01601 117 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 RAB5AP20339 215 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 PSMA3P25788 255 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 OR3A4PP47883 348 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 LIMK1P53667 647 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 SLC17A1Q14916 467 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 WBP2NLQ6ICG8 309 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 ZNF880Q6PDB4 577 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 CLEC18BQ6UXF7 455 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 TSPAN32Q96QS1 320 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 MRPS18AQ9NVS2 196 aaKnown RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 LIPGQ9Y5X9 500 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 DOCK10Q96BY6 2186 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 OGG1O15527 345 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 SSSCA1O60232 199 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 RAB4BP61018 213 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 TRA2BP62995 288 aaKnown RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 RNF212Q495C1 297 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 GFI1BQ5VTD9 330 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 ZNF776Q68DI1 518 aaPredicted RBP7.88□□□□□ -1.15
RTN4-206ENST00000394611 C6orf201Q7Z4U5 140 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 ZNF485Q8NCK3 441 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 SLC26A10Q8NG04 563 aa7.88□□□□□ -1.15
RTN4-206ENST00000394611 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms