RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 AIFM2Q9BRQ8 373 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 WNT16Q9UBV4 365 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 CACNA1EQ15878 2313 aa22.3■■□□□ 1.16
C9orf40-201ENST00000376854 CEACAM18A8MTB9 384 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 F8VVB4 439 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 F8VWA3 439 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 PI3P19957 117 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 UQCC3Q6UW78 93 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 WDSUB1Q8N9V3 476 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 OR14K1Q8NGZ2 314 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 SPACA9Q96E40 222 aaPredicted RBP22.29■■□□□ 1.16
C9orf40-201ENST00000376854 SHDQ96IW2 340 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 RASL10BQ96S79 203 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 SPSB2Q99619 263 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 OR10A2Q9H208 303 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 AQP7P3A6NL99 342 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 TSPAN9O75954 239 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 TPT1P13693 172 aaKnown RBP22.29■■□□□ 1.16
C9orf40-201ENST00000376854 AMY2BP19961 511 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 SSC4DQ8WTU2 575 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 SLC25A43Q8WUT9 341 aaPredicted RBP22.29■■□□□ 1.16
C9orf40-201ENST00000376854 ROBO4Q8WZ75 1007 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 FLVCR1Q9Y5Y0 555 aa22.29■■□□□ 1.16
C9orf40-201ENST00000376854 RALGAPA1Q6GYQ0 2036 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 E9PLN8 166 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 DMDP11532 3685 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 CBX5P45973 191 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 CXCL12P48061 93 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 SGCAQ16586 387 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 LCN10Q6JVE6 187 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 GTPBP8Q8N3Z3 284 aaPredicted RBP22.28■■□□□ 1.16
C9orf40-201ENST00000376854 OR51T1Q8NGJ9 327 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 OR5D18Q8NGL1 313 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 RRNAD1Q96FB5 475 aaKnown RBP22.28■■□□□ 1.16
C9orf40-201ENST00000376854 CDC6Q99741 560 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 ST6GALNAC5Q9BVH7 336 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 PRR13Q9NZ81 148 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 HDGFL3Q9Y3E1 203 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 ADAP1O75689 374 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 PLATP00750 562 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 FPR2P25090 351 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 CLDN17P56750 224 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 ZSCAN4Q8NAM6 433 aaPredicted RBP22.28■■□□□ 1.16
C9orf40-201ENST00000376854 PGAM5Q96HS1 289 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 SCGB3A2Q96PL1 93 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 MICU1Q9BPX6 476 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 ZNF416Q9BWM5 594 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 DEFB126Q9BYW3 111 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 NKX6-2Q9C056 277 aaPredicted RBP22.28■■□□□ 1.16
C9orf40-201ENST00000376854 RAB18Q9NP72 206 aa22.28■■□□□ 1.16
C9orf40-201ENST00000376854 A0A1W2PQM1 296 aa22.27■■□□□ 1.16
C9orf40-201ENST00000376854 RAB19A4D1S5 217 aa22.27■■□□□ 1.16
C9orf40-201ENST00000376854 C5orf63A6NC05 138 aa22.27■■□□□ 1.16
C9orf40-201ENST00000376854 H0YIZ8 118 aa22.27■■□□□ 1.16
C9orf40-201ENST00000376854 ZNF385CQ66K41 422 aaPredicted RBP22.27■■□□□ 1.16
C9orf40-201ENST00000376854 PNLDC1Q8NA58 520 aaKnown RBP22.27■■□□□ 1.16
C9orf40-201ENST00000376854 A0A0B4J2A0 478 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 FAM74A7A6NL05 159 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 MPTX1A8MV57 137 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 FGF16O43320 207 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 TLX3O43711 291 aaPredicted RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 OR3A2P47893 321 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 DHPSP49366 369 aaPredicted RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 ZNF239Q16600 458 aaKnown RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 FAM74A3Q4VXF1 159 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 PRAMEF20Q5VT98 475 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 PEG10Q86TG7 708 aaKnown RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 OR13G1Q8NGZ3 307 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 NPRL2Q8WTW4 380 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 RTBDNQ9BSG5 229 aaPredicted RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 C19orf25Q9UFG5 118 aaPredicted RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 SHPKQ9UHJ6 478 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 EIF1P41567 113 aaKnown RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 SUPT4H1P63272 117 aaKnown RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 CCL7P80098 99 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 ECH1Q13011 328 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 KISS1Q15726 138 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 BAP18Q8IXM2 172 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 FADS6Q8N9I5 356 aa22.26■■□□□ 1.15
C9orf40-201ENST00000376854 LIN37Q96GY3 246 aaPredicted RBP22.26■■□□□ 1.15
C9orf40-201ENST00000376854 LY6G6EA0A0G2JKS1 128 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 DKK1O94907 266 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 HTR3BO95264 441 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 PTGFRP43088 359 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 SLC35A1P78382 337 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 C1QL2Q7Z5L3 287 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 FAM89BQ8N5H3 189 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 SLC30A7Q8NEW0 376 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 PAQR8Q8TEZ7 354 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 LYZL4Q96KX0 146 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 U3KQA8 63 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 LOC102725191A0A1B0GVB3 256 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 ADH6P28332 368 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 CSNK2A1P68400 391 aaPredicted RBP22.25■■□□□ 1.15
C9orf40-201ENST00000376854 NAAAQ02083 359 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 AIMP2Q13155 320 aaKnown RBP22.25■■□□□ 1.15
C9orf40-201ENST00000376854 ZNF169Q14929 603 aaPredicted RBP22.25■■□□□ 1.15
C9orf40-201ENST00000376854 ANKRD55Q3KP44 614 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 LHFPL1Q86WI0 220 aa22.25■■□□□ 1.15
C9orf40-201ENST00000376854 CSNK2A3Q8NEV1 391 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms