RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 A0A1B0GUS0 222 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 K7EP13 123 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 EIF4E2O60573 245 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CD160O95971 181 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 IGHV4-34P06331 123 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ELANEP08246 267 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CST2P09228 141 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 FAM228BP0C875 321 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 HIST1H1EP10412 219 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 H2AFXP16104 143 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 RAB3AP20336 220 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 NR4A1P22736 598 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 F2RP25116 425 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 PSMA1P25786 263 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ZFP36P26651 326 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 LOXP28300 417 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CCR7P32248 378 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 APOBEC1P41238 236 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 RAB7AP51149 207 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 VAMP7P51809 220 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 STC1P52823 247 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CLDN20P56880 219 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 RAB2AP61019 212 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ELF3P78545 371 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ID2Q02363 134 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CFHR3Q02985 330 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 MFGE8Q08431 387 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 PNRC1Q12796 327 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 GPR50Q13585 617 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CEACAM7Q14002 265 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 TSNQ15631 228 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ANXA2RQ3ZCQ2 193 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ACTL10Q5JWF8 245 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ELFN2Q5R3F8 820 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 LY6G5CQ5SRR4 150 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 C1orf220Q5T0J3 134 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 B3GNTL1Q67FW5 361 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 PNCKQ6P2M8 343 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 Q6ZSR3 168 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 PEG10Q86TG7 708 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 NIT1Q86X76 327 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 OR51F2Q8NH61 342 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 OR2AE1Q8NHA4 323 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 STMN2Q93045 179 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 TAAR8Q969N4 342 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 TESCQ96BS2 214 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 SDSLQ96GA7 329 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 KCTD7Q96MP8 289 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CLCC1Q96S66 551 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ZNF347Q96SE7 839 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 APOL4Q9BPW4 351 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 NIPSNAP3BQ9BS92 247 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 THAP7Q9BT49 309 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 YIPF3Q9GZM5 350 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 NXF5Q9H1B4 397 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 NEUROG2Q9H2A3 272 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 DDX31Q9H8H2 851 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 RNF121Q9H920 327 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 UGT1A8Q9HAW9 530 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 IFT46Q9NQC8 304 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 GDF3Q9NR23 364 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 DCAF13Q9NV06 445 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 FAIMQ9NVQ4 179 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 TECRQ9NZ01 308 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CISD1Q9NZ45 108 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 GSKIPQ9P0R6 139 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 PRODH2Q9UF12 536 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 KLHDC2Q9Y2U9 406 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 HSPB11Q9Y547 144 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 UBIAD1Q9Y5Z9 338 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 PLXNA2O75051 1894 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 A0A0B4J2E0 115 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 KIR2DS1A0A191URI9 304 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 A0A1B0GV90 55 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 A0A1B0GX12 115 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 ANKRD20A5PA0PJZ0 165 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 OR2M5A3KFT3 312 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 EFCAB9A8MZ26 197 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 FAM25AB3EWG3 89 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 FAM25CB3EWG5 89 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 FAM25GB3EWG6 89 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 SEC14L6B5MCN3 397 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 SLC1A7O00341 560 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 AZIN1O14977 448 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 UBDO15205 165 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 SPINT2O43291 252 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 RAD1O60671 282 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CTSVO60911 334 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 CRLF1O75462 422 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 RP2O75695 350 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 HPP00738 406 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 THY1P04216 161 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 S100A8P05109 93 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 WNT2P09544 360 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 TACSTD2P09758 323 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 MAKP20794 623 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 SERPINA2P20848 420 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 HTR1FP30939 366 aa3.01□□□□□ -1.93
ECHDC1-205ENST00000368295 SDC4P31431 198 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms