RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GABRG1Q8N1C3 465 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF610Q8N9Z0 462 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 OR1K1Q8NGR3 316 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 HAVCR2Q8TDQ0 301 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 BCL2L2Q92843 193 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-201ENST00000343575 TMPRSS13Q9BYE2 586 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 WNT5BQ9H1J7 359 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 OPN3Q9H1Y3 402 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-201ENST00000343575 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 SYNGR3O43761 229 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 MTRF1O75570 445 aaKnown RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 CNOT4O95628 575 aaKnown RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ECDO95905 644 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 IL2RAP01589 272 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 CXCL3P19876 107 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 CTSSP25774 331 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 GIFP27352 417 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 OTX1P32242 354 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 MAGEB1P43366 347 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 MMP16P51512 607 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 PMPCAQ10713 525 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ELFN2Q5R3F8 820 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF774Q6NX45 483 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 SYT9Q86SS6 491 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 NAA40Q86UY6 237 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 SPICQ8N5J4 248 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 OR10AC1Q8NH08 325 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ABHD4Q8TB40 342 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 GIMAP1Q8WWP7 306 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ABHD1Q96SE0 405 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 OR2H1Q9GZK4 316 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 R4GMQ9 66 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 PCNX1Q96RV3 2341 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 PRR14LQ5THK1 2151 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 A0A0G2JNJ9 132 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 CIB4A0PJX0 185 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 C5orf63A6NC05 138 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 E9PLN8 166 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 SCO1O75880 301 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 HLA-HP01893 362 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 DBHP09172 617 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 COX5AP20674 150 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 CRYGSP22914 178 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 NUP62P37198 522 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 CCR9P51686 369 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 SNTB2Q13425 540 aaKnown RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ST3GAL2Q16842 350 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 KRTAP27-1Q3LI81 207 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 HIKESHIQ53FT3 197 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 FAM27D1Q5T7N8 215 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 OVCH2Q7RTZ1 564 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ABHD12BQ7Z5M8 362 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF433Q8N7K0 673 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 OR2T35Q8NGX2 323 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 AKR7LQ8NHP1 331 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 WBP1Q96G27 269 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ZFP3Q96NJ6 502 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ZCCHC4Q9H5U6 513 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 PLEK2Q9NYT0 353 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 Q9UFV3 132 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 SH3BGRL2Q9UJC5 107 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 TIMM10BQ9Y5J6 103 aa12.8□□□□□ -0.36
CXCL12-201ENST00000343575 SMG1Q96Q15 3661 aaKnown RBP12.8□□□□□ -0.36
CXCL12-201ENST00000343575 RELNP78509 3460 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 A0A1B0GUH1 482 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 TMEM269A0A1B0GVZ9 245 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 OR6C6A6NF89 314 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 SGCEO43556 437 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 DOK2O60496 412 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 PRKXP51817 358 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 HGFACQ04756 655 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 OPCMLQ14982 345 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 NHLRC3Q5JS37 347 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 ANKRD16Q6P6B7 361 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF474Q6S9Z5 364 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-201ENST00000343575 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 NR2C2APQ86WQ0 139 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-201ENST00000343575 FTMTQ8N4E7 242 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-201ENST00000343575 ST6GALNAC3Q8NDV1 305 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 CPEB3Q8NE35 698 aaKnown RBP12.79□□□□□ -0.36
CXCL12-201ENST00000343575 PLEKHA1Q9HB21 404 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF281Q9Y2X9 895 aa12.79□□□□□ -0.36
CXCL12-201ENST00000343575 A0A0G2JK05 382 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 MFSD2BA6NFX1 497 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 LYZL6O75951 148 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 FARS2O95363 451 aaKnown RBP12.78□□□□□ -0.36
CXCL12-201ENST00000343575 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-201ENST00000343575 RAB3BP20337 219 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 RAP2BP61225 183 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 SCRN3Q0VDG4 424 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 KLF9Q13886 244 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-201ENST00000343575 RAB35Q15286 201 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 GABRA6Q16445 453 aa12.78□□□□□ -0.36
CXCL12-201ENST00000343575 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms