RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CNTNAP3Q9BZ76 1288 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF701Q9NV72 531 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 VSX1Q9NZR4 365 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 POLR1DQ9Y2S0 133 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 NOSIPQ9Y314 301 aaKnown RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 H7C1Q1 480 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 AHSA1O95433 338 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 HIST1H1DP16402 221 aaKnown RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 FPR2P25090 351 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 CSNK1EP49674 416 aaKnown RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 TMEM196Q5HYL7 178 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 WDFY1Q8IWB7 410 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ARRDC1Q8N5I2 433 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 HSD17B11Q8NBQ5 300 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 NUDT22Q9BRQ3 303 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 PBOV1Q9GZY1 135 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ELL3Q9HB65 397 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF878C9JN71 531 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 NPIPA5E9PKD4 350 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 GATCO43716 136 aaKnown RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 JTBO76095 146 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF205O95201 554 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ISG15P05161 165 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 IFI6P09912 130 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 DEFA6Q01524 100 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 TMEM268Q5VZI3 342 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 TSLPQ969D9 159 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 RHOVQ96L33 236 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 FAM212BQ9NTI7 297 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-202ENST00000310645 NPIPA1Q9UND3 350 aa13.01□□□□□ -0.33
COL6A2-202ENST00000310645 SZT2Q5T011 3432 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 PLPP3O14495 311 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 XRCC2O43543 280 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 CD37P11049 281 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 CCL5P13501 91 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 COL9A1P20849 921 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 SNCAP37840 140 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 ACTBL2Q562R1 376 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 TMEM151BQ8IW70 566 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 FNDC9Q8TBE3 224 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF296Q8WUU4 475 aaPredicted RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 SLAMF6Q96DU3 332 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 SCGB3A2Q96PL1 93 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 PHF3Q92576 2039 aaKnown RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 LINC01553A4QN01 128 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 TMEM14DPA8MWL7 114 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 NSA2O95478 260 aaKnown RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 IFNA17P01571 189 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 CLPSP04118 112 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 ASCL1P50553 236 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 POU3F1Q03052 451 aaPredicted RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 HMGN3Q15651 99 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 C19orf47Q8N9M1 422 aaKnown RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 OR2C1O95371 312 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 LYL1P12980 280 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 PGCP20142 388 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 PAX6P26367 422 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 SLC26A5P58743 744 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 HHEXQ03014 270 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 CHRFAM7AQ494W8 412 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 AADACL3Q5VUY0 350 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 HLA-DQA1Q5Y7H0 255 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 Q6ZSR6 202 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 Q7L0L9 218 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 PEG10Q86TG7 708 aaKnown RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 OR51T1Q8NGJ9 327 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 PRRX2Q99811 253 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 C14orf166Q9Y224 244 aaKnown RBP13□□□□□ -0.33
COL6A2-202ENST00000310645 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
COL6A2-202ENST00000310645 B4DGG1 531 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 CDC14BO60729 498 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 DIRAS3O95661 229 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 CHRM2P08172 466 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 HOXB2P14652 356 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 OR1D4P47884 311 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 SLC6A8P48029 635 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 SLC37A1P57057 533 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 SP6Q3SY56 376 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF529Q6P280 563 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF383Q8NA42 475 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 PTPMT1Q8WUK0 201 aaPredicted RBP12.99□□□□□ -0.33
COL6A2-202ENST00000310645 MRPL24Q96A35 216 aaKnown RBP12.99□□□□□ -0.33
COL6A2-202ENST00000310645 C5orf34Q96MH7 638 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 RPP25Q9BUL9 199 aaKnown RBP12.99□□□□□ -0.33
COL6A2-202ENST00000310645 RHPN2P1A8MT19 583 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 ZNF727A8MUV8 499 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 OPN1LWP04000 364 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 RNF224P0DH78 156 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 S100A2P29034 98 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 PTGER4P35408 488 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 RAB5CP51148 216 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 VAX1Q5SQQ9 334 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 CDCP2Q5VXM1 449 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 RPUSD3Q6P087 351 aaKnown RBP12.99□□□□□ -0.33
COL6A2-202ENST00000310645 MFSD8Q8NHS3 518 aa12.99□□□□□ -0.33
COL6A2-202ENST00000310645 CAPNS2Q96L46 248 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms