RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 OR5D14Q8NGL3 314 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 FAHD2AQ96GK7 314 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 PLA2G2FQ9BZM2 168 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF700Q9H0M5 742 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 TMPRSS5Q9H3S3 457 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL6A2-201ENST00000300527 VDAC3Q9Y277 283 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 RFNGQ9Y644 331 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 RP1P56715 2156 aa13.02□□□□□ -0.33
COL6A2-201ENST00000300527 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 PRR19A6NJB7 356 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 SHISA8B8ZZ34 492 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 GPR37O15354 613 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 CST4P01036 141 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 MYOGP15173 224 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF708P17019 499 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 RGS19P49795 217 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 FXYD4P59646 89 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 C1orf140Q5VVS0 124 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 FDX2Q6P4F2 183 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 MEGF10Q96KG7 1140 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 SH3BGRL3Q9H299 93 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 TXNIPQ9H3M7 391 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 RHPN2P1A8MT19 583 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 CD37P11049 281 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 PRF1P14222 555 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 HOXB2P14652 356 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 FSTP19883 344 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 ZNF343Q6P1L6 599 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM182Q6ZP80 229 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 SHISA6Q6ZSJ9 500 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 HIST2H3AQ71DI3 136 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 BMFQ96LC9 184 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 B3GALT1Q9Y5Z6 326 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 MYO15AQ9UKN7 3530 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 TRBV6-7A0A0A0MS04 114 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 ATXN7O15265 892 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 CTSEP14091 401 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 HHEXQ03014 270 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 ACY1Q03154 408 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 ROM1Q03395 351 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 PRTGQ2VWP7 1150 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM151BQ8IW70 566 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 POC1AQ8NBT0 407 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 MRPL24Q96A35 216 aaKnown RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 SGK3Q96BR1 496 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 RTBDNQ9BSG5 229 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 RPP25Q9BUL9 199 aaKnown RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 PBOV1Q9GZY1 135 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 LPAR5Q9H1C0 372 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 SEBOXQ9HB31 216 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 FAM212BQ9NTI7 297 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM184BQ9Y519 407 aaPredicted RBP13.01□□□□□ -0.33
COL6A2-201ENST00000300527 TIMM10BQ9Y5J6 103 aa13.01□□□□□ -0.33
COL6A2-201ENST00000300527 PMS2P1A4D2B8 440 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 FOLR2P14207 255 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 CRABP1P29762 137 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 CHAF1BQ13112 559 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 RSPO4Q2I0M5 234 aaPredicted RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 C4orf17Q53FE4 359 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 TSPO2Q5TGU0 170 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 RPUSD3Q6P087 351 aaKnown RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 Q6ZSR6 202 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 P4HA3Q7Z4N8 544 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 ZDHHC19Q8WVZ1 309 aaPredicted RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 SLAMF6Q96DU3 332 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 PLRG1O43660 514 aaKnown RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 IFNA21P01568 189 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 TTRP02766 147 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 OMGP23515 440 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 BLVRBP30043 206 aaPredicted RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 PPP1CCP36873 323 aaKnown RBP13□□□□□ -0.33
COL6A2-201ENST00000300527 RAB5CP51148 216 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 PLCXD2Q0VAA5 305 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 SGCBQ16585 318 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 DTWD2Q8NBA8 298 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 RARRES2Q99969 163 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 TNFSF12-TNFSF13A0A0A6YY99 330 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 TNFSF12O43508 249 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 BPNT1O95861 308 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 FBP1P09467 338 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 CDAP32320 146 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 GKN2Q86XP6 184 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 PRRX2Q99811 253 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 PARP11Q9NR21 331 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
COL6A2-201ENST00000300527 HSPB2A8KAH6 182 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 LINC00271P0C7V0 271 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 COL9A1P20849 921 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 GABRR1P24046 479 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 NOGQ13253 232 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 HSPB2Q16082 182 aa12.99□□□□□ -0.33
COL6A2-201ENST00000300527 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL6A2-201ENST00000300527 TMEM196Q5HYL7 178 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms