RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J MUB1Q03162 620 aa5.84□□□□□ -1.47
HSX1tR(CCU)J TSR1Q07381 788 aaKnown RBP5.84□□□□□ -1.47
HSX1tR(CCU)J ATG9Q12142 997 aa5.84□□□□□ -1.47
HSX1tR(CCU)J PGS1P25578 521 aa5.83□□□□□ -1.48
HSX1tR(CCU)J PDC6P26263 563 aaKnown RBP5.83□□□□□ -1.48
HSX1tR(CCU)J SPC110P32380 944 aa5.83□□□□□ -1.48
HSX1tR(CCU)J TKL2P33315 681 aa5.83□□□□□ -1.48
HSX1tR(CCU)J EBP2P36049 427 aaKnown RBP5.83□□□□□ -1.48
HSX1tR(CCU)J EXO5P38289 585 aa5.83□□□□□ -1.48
HSX1tR(CCU)J RGD1P38339 666 aa5.83□□□□□ -1.48
HSX1tR(CCU)J RAD55P38953 406 aa5.83□□□□□ -1.48
HSX1tR(CCU)J YTA12P40341 825 aa5.83□□□□□ -1.48
HSX1tR(CCU)J SHQ1P40486 507 aaPredicted RBP5.83□□□□□ -1.48
HSX1tR(CCU)J OYE3P41816 400 aaPredicted RBP5.83□□□□□ -1.48
HSX1tR(CCU)J MAF1P41910 395 aa5.83□□□□□ -1.48
HSX1tR(CCU)J YNL011CP53980 444 aa5.83□□□□□ -1.48
HSX1tR(CCU)J PIG1Q06216 648 aa5.83□□□□□ -1.48
HSX1tR(CCU)J TRE1Q08919 783 aa5.83□□□□□ -1.48
HSX1tR(CCU)J LEA1Q08963 238 aaPredicted RBP5.83□□□□□ -1.48
HSX1tR(CCU)J GPM2Q12008 311 aa5.83□□□□□ -1.48
HSX1tR(CCU)J TAF10Q12030 206 aa5.83□□□□□ -1.48
HSX1tR(CCU)J SPE3Q12074 293 aaKnown RBP5.83□□□□□ -1.48
HSX1tR(CCU)J YOL098CQ12496 1037 aa5.83□□□□□ -1.48
HSX1tR(CCU)J MAS1P10507 462 aa5.82□□□□□ -1.48
HSX1tR(CCU)J EST1P17214 699 aaPredicted RBP5.82□□□□□ -1.48
HSX1tR(CCU)J SPT5P27692 1063 aaKnown RBP5.82□□□□□ -1.48
HSX1tR(CCU)J MRP4P32902 394 aa5.82□□□□□ -1.48
HSX1tR(CCU)J JNM1P36224 373 aa5.82□□□□□ -1.48
HSX1tR(CCU)J YHR131CP38835 850 aa5.82□□□□□ -1.48
HSX1tR(CCU)J TGL3P40308 642 aa5.82□□□□□ -1.48
HSX1tR(CCU)J ATG3P40344 310 aa5.82□□□□□ -1.48
HSX1tR(CCU)J VPS25P47142 202 aa5.82□□□□□ -1.48
HSX1tR(CCU)J HOP2P53187 214 aa5.82□□□□□ -1.48
HSX1tR(CCU)J ALF1P53904 254 aa5.82□□□□□ -1.48
HSX1tR(CCU)J SLG1P54867 378 aa5.82□□□□□ -1.48
HSX1tR(CCU)J CTR9P89105 1077 aa5.82□□□□□ -1.48
HSX1tR(CCU)J YPL062WQ02781 134 aa5.82□□□□□ -1.48
HSX1tR(CCU)J UTP5Q04177 643 aaKnown RBP5.82□□□□□ -1.48
HSX1tR(CCU)J YLR257WQ06146 321 aaKnown RBP5.82□□□□□ -1.48
HSX1tR(CCU)J APL4Q12028 832 aa5.82□□□□□ -1.48
HSX1tR(CCU)J HRT3Q12347 344 aa5.82□□□□□ -1.48
HSX1tR(CCU)J BI2P03873 423 aa5.81□□□□□ -1.48
HSX1tR(CCU)J BI4P03879 638 aa5.81□□□□□ -1.48
HSX1tR(CCU)J SPE1P08432 466 aa5.81□□□□□ -1.48
HSX1tR(CCU)J PEX1P24004 1043 aa5.81□□□□□ -1.48
HSX1tR(CCU)J TSA1P34760 196 aaKnown RBP5.81□□□□□ -1.48
HSX1tR(CCU)J YBL036CP38197 257 aa5.81□□□□□ -1.48
HSX1tR(CCU)J SIF2P38262 535 aa5.81□□□□□ -1.48
HSX1tR(CCU)J PCM1P38628 557 aaKnown RBP5.81□□□□□ -1.48
HSX1tR(CCU)J RIM4P38741 713 aa5.81□□□□□ -1.48
HSX1tR(CCU)J YGR021WP53212 290 aa5.81□□□□□ -1.48
HSX1tR(CCU)J GPD1Q00055 391 aaKnown RBP5.81□□□□□ -1.48
HSX1tR(CCU)J SYH1Q02875 849 aaKnown RBP5.81□□□□□ -1.48
HSX1tR(CCU)J ERV41Q04651 352 aa5.81□□□□□ -1.48
HSX1tR(CCU)J VPS38Q05919 439 aa5.81□□□□□ -1.48
HSX1tR(CCU)J YCG1Q06680 1035 aa5.81□□□□□ -1.48
HSX1tR(CCU)J OPY2Q06810 360 aa5.81□□□□□ -1.48
HSX1tR(CCU)J DIS3Q08162 1001 aaKnown RBP5.81□□□□□ -1.48
HSX1tR(CCU)J APC5Q08683 685 aa5.81□□□□□ -1.48
HSX1tR(CCU)J VPS54Q12071 889 aa5.81□□□□□ -1.48
HSX1tR(CCU)J DAS2Q12084 232 aa5.81□□□□□ -1.48
HSX1tR(CCU)J DAP1Q12091 152 aa5.81□□□□□ -1.48
HSX1tR(CCU)J BI3Q9ZZW7 517 aa5.81□□□□□ -1.48
HSX1tR(CCU)J YMR084WA2P2R3 262 aa5.8□□□□□ -1.48
HSX1tR(CCU)J JIP3O13555 125 aa5.8□□□□□ -1.48
HSX1tR(CCU)J MTF2P10849 440 aa5.8□□□□□ -1.48
HSX1tR(CCU)J HMG2P12684 1045 aa5.8□□□□□ -1.48
HSX1tR(CCU)J CYC8P14922 966 aa5.8□□□□□ -1.48
HSX1tR(CCU)J SEC23P15303 768 aaKnown RBP5.8□□□□□ -1.48
HSX1tR(CCU)J COQ8P27697 501 aa5.8□□□□□ -1.48
HSX1tR(CCU)J HXT1P32465 570 aa5.8□□□□□ -1.48
HSX1tR(CCU)J ABZ1P37254 787 aaPredicted RBP5.8□□□□□ -1.48
HSX1tR(CCU)J CDC27P38042 758 aa5.8□□□□□ -1.48
HSX1tR(CCU)J FHL1P39521 936 aa5.8□□□□□ -1.48
HSX1tR(CCU)J YEL075CP39972 122 aa5.8□□□□□ -1.48
HSX1tR(CCU)J MOB1P40484 314 aa5.8□□□□□ -1.48
HSX1tR(CCU)J ASG7P46993 209 aa5.8□□□□□ -1.48
HSX1tR(CCU)J YMR1P47147 688 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
HSX1tR(CCU)J CEG1Q01159 459 aaPredicted RBP5.8□□□□□ -1.48
HSX1tR(CCU)J ARO80Q04052 950 aa5.8□□□□□ -1.48
HSX1tR(CCU)J PRM6Q04705 352 aa5.8□□□□□ -1.48
HSX1tR(CCU)J YDR222WQ04925 415 aa5.8□□□□□ -1.48
HSX1tR(CCU)J NBP2Q12163 236 aa5.8□□□□□ -1.48
HSX1tR(CCU)J APE1P14904 514 aa5.79□□□□□ -1.48
HSX1tR(CCU)J LRE1P25579 583 aaKnown RBP5.79□□□□□ -1.48
HSX1tR(CCU)J ISF1P32488 338 aa5.79□□□□□ -1.48
HSX1tR(CCU)J DSS4P32601 143 aa5.79□□□□□ -1.48
HSX1tR(CCU)J YKL050CP35736 922 aa5.79□□□□□ -1.48
HSX1tR(CCU)J YKR051WP36142 418 aa5.79□□□□□ -1.48
HSX1tR(CCU)J YBR056WP38081 501 aa5.79□□□□□ -1.48
HSX1tR(CCU)J PCH2P38126 564 aa5.79□□□□□ -1.48
HSX1tR(CCU)J TDA3P38758 523 aa5.79□□□□□ -1.48
HSX1tR(CCU)J QNS1P38795 714 aaKnown RBP5.79□□□□□ -1.48
HSX1tR(CCU)J PEX28P38848 579 aa5.79□□□□□ -1.48
HSX1tR(CCU)J SET5P38890 526 aaKnown RBP5.79□□□□□ -1.48
HSX1tR(CCU)J LSB6P42951 607 aa5.79□□□□□ -1.48
HSX1tR(CCU)J SNZ3P43545 298 aa5.79□□□□□ -1.48
HSX1tR(CCU)J YGR111WP53265 400 aa5.79□□□□□ -1.48
HSX1tR(CCU)J SNZ2P53824 298 aa5.79□□□□□ -1.48
HSX1tR(CCU)J HER2Q03557 464 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms