RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W GID8P40208 455 aa3.72□□□□□ -1.81
CTK3YML112W ARP4P80428 489 aa3.72□□□□□ -1.81
CTK3YML112W LGE1Q02796 332 aaKnown RBP3.72□□□□□ -1.81
CTK3YML112W LEE1Q02799 301 aaKnown RBP3.72□□□□□ -1.81
CTK3YML112W NTG2Q08214 380 aa3.72□□□□□ -1.81
CTK3YML112W MLH3Q12083 715 aa3.72□□□□□ -1.81
CTK3YML112W ZRT2Q12436 422 aa3.72□□□□□ -1.81
CTK3YML112W SFL1P20134 766 aa3.71□□□□□ -1.82
CTK3YML112W PEX1P24004 1043 aa3.71□□□□□ -1.82
CTK3YML112W UBS1P38290 277 aa3.71□□□□□ -1.82
CTK3YML112W PCM1P38628 557 aaKnown RBP3.71□□□□□ -1.82
CTK3YML112W CRP1P38845 465 aaKnown RBP3.71□□□□□ -1.82
CTK3YML112W ARG2P40360 574 aa3.71□□□□□ -1.82
CTK3YML112W YIL166CP40445 542 aa3.71□□□□□ -1.82
CTK3YML112W CCT7P42943 550 aaKnown RBP3.71□□□□□ -1.82
CTK3YML112W COX18P53239 316 aa3.71□□□□□ -1.82
CTK3YML112W FHN1P53279 174 aa3.71□□□□□ -1.82
CTK3YML112W ATG4P53867 494 aa3.71□□□□□ -1.82
CTK3YML112W HMO1Q03973 246 aaKnown RBP3.71□□□□□ -1.82
CTK3YML112W DIA2Q08496 732 aaPredicted RBP3.71□□□□□ -1.82
CTK3YML112W TAF3Q12297 353 aa3.71□□□□□ -1.82
CTK3YML112W YTA7P40340 1379 aa3.71□□□□□ -1.82
CTK3YML112W HMG1P12683 1054 aa3.7□□□□□ -1.82
CTK3YML112W CCR4P31384 837 aaKnown RBP3.7□□□□□ -1.82
CTK3YML112W SET2P46995 733 aaKnown RBP3.7□□□□□ -1.82
CTK3YML112W NOP9P47077 666 aaKnown RBP3.7□□□□□ -1.82
CTK3YML112W FPR4Q06205 392 aaPredicted RBP3.7□□□□□ -1.82
CTK3YML112W NDJ1Q12366 352 aa3.7□□□□□ -1.82
CTK3YML112W BNR1P40450 1375 aa3.69□□□□□ -1.82
CTK3YML112W TUB1P09733 447 aaKnown RBP3.69□□□□□ -1.82
CTK3YML112W PEX2P32800 271 aa3.69□□□□□ -1.82
CTK3YML112W APN2P38207 520 aa3.69□□□□□ -1.82
CTK3YML112W RIX1P38883 763 aaPredicted RBP3.69□□□□□ -1.82
CTK3YML112W YNL195CP40168 261 aa3.69□□□□□ -1.82
CTK3YML112W BRE5P53741 515 aaKnown RBP3.69□□□□□ -1.82
CTK3YML112W ORC1P54784 914 aaPredicted RBP3.69□□□□□ -1.82
CTK3YML112W ILV6P25605 309 aaKnown RBP3.68□□□□□ -1.82
CTK3YML112W EMP70P32802 667 aa3.68□□□□□ -1.82
CTK3YML112W SSZ1P38788 538 aaKnown RBP3.68□□□□□ -1.82
CTK3YML112W RSC8P43609 557 aaKnown RBP3.68□□□□□ -1.82
CTK3YML112W MET13P53128 600 aa3.68□□□□□ -1.82
CTK3YML112W YNL193WP53870 558 aa3.68□□□□□ -1.82
CTK3YML112W TFB2Q02939 513 aa3.68□□□□□ -1.82
CTK3YML112W ISA1Q07821 250 aaPredicted RBP3.68□□□□□ -1.82
CTK3YML112W CLF1Q12309 687 aaPredicted RBP3.68□□□□□ -1.82
CTK3YML112W ECM3Q99252 613 aa3.68□□□□□ -1.82
CTK3YML112W THR1P17423 357 aaKnown RBP3.67□□□□□ -1.82
CTK3YML112W BCS1P32839 456 aa3.67□□□□□ -1.82
CTK3YML112W AKL1P38080 1108 aaKnown RBP3.67□□□□□ -1.82
CTK3YML112W YHR202WP38887 602 aa3.67□□□□□ -1.82
CTK3YML112W BDH2P39713 417 aa3.67□□□□□ -1.82
CTK3YML112W YJR039WP47107 1121 aa3.67□□□□□ -1.82
CTK3YML112W GPD1Q00055 391 aaKnown RBP3.67□□□□□ -1.82
CTK3YML112W APM1Q00776 475 aaPredicted RBP3.67□□□□□ -1.82
CTK3YML112W ARO10Q06408 635 aa3.67□□□□□ -1.82
CTK3YML112W YLR001CQ07895 862 aa3.67□□□□□ -1.82
CTK3YML112W USV1Q12132 391 aa3.67□□□□□ -1.82
CTK3YML112W ADY2P25613 283 aa3.66□□□□□ -1.82
CTK3YML112W PPG1P32838 368 aa3.66□□□□□ -1.82
CTK3YML112W FLO10P36170 1169 aa3.66□□□□□ -1.82
CTK3YML112W BIT2P38346 545 aa3.66□□□□□ -1.82
CTK3YML112W PIG2P40187 538 aa3.66□□□□□ -1.82
CTK3YML112W RNH70P53331 553 aa3.66□□□□□ -1.82
CTK3YML112W THI22Q06490 572 aa3.66□□□□□ -1.82
CTK3YML112W GUD1Q07729 489 aa3.66□□□□□ -1.82
CTK3YML112W DCS2Q12123 353 aa3.66□□□□□ -1.82
CTK3YML112W RPN13O13563 156 aa3.65□□□□□ -1.83
CTK3YML112W SPO11P23179 398 aa3.65□□□□□ -1.83
CTK3YML112W PRP28P23394 588 aa3.65□□□□□ -1.83
CTK3YML112W FUB1P25659 250 aa3.65□□□□□ -1.83
CTK3YML112W RRP14P36080 434 aaKnown RBP3.65□□□□□ -1.83
CTK3YML112W SET3P36124 751 aa3.65□□□□□ -1.83
CTK3YML112W GMH1P36125 273 aa3.65□□□□□ -1.83
CTK3YML112W YEL020CP39994 560 aa3.65□□□□□ -1.83
CTK3YML112W ALG12P53730 551 aa3.65□□□□□ -1.83
CTK3YML112W VHS3Q08438 674 aa3.65□□□□□ -1.83
CTK3YML112W SEC6P32844 805 aa3.64□□□□□ -1.83
CTK3YML112W NUG1P40010 520 aaKnown RBP3.64□□□□□ -1.83
CTK3YML112W YGR151CP53287 111 aa3.64□□□□□ -1.83
CTK3YML112W CHS5Q12114 671 aaKnown RBP3.64□□□□□ -1.83
CTK3YML112W POM34Q12445 299 aa3.64□□□□□ -1.83
CTK3YML112W NOP14Q99207 810 aaKnown RBP3.64□□□□□ -1.83
CTK3YML112W ABF1P14164 731 aa3.63□□□□□ -1.83
CTK3YML112W RPL8AP17076 256 aaKnown RBP3.63□□□□□ -1.83
CTK3YML112W FEN2P25621 512 aaKnown RBP3.63□□□□□ -1.83
CTK3YML112W SFP1P32432 683 aa3.63□□□□□ -1.83
CTK3YML112W YKR075CP36155 307 aa3.63□□□□□ -1.83
CTK3YML112W MAL31P38156 614 aa3.63□□□□□ -1.83
CTK3YML112W YHR097CP38809 366 aaKnown RBP3.63□□□□□ -1.83
CTK3YML112W BEM4P39011 633 aa3.63□□□□□ -1.83
CTK3YML112W MGS1P40151 587 aa3.63□□□□□ -1.83
CTK3YML112W IMO32P53219 342 aa3.63□□□□□ -1.83
CTK3YML112W COQ11Q05892 277 aa3.63□□□□□ -1.83
CTK3YML112W VPS36Q06696 566 aa3.63□□□□□ -1.83
CTK3YML112W YDL086WQ07505 273 aa3.63□□□□□ -1.83
CTK3YML112W ERG20P08524 352 aaKnown RBP3.62□□□□□ -1.83
CTK3YML112W FRS1P15624 595 aaKnown RBP3.62□□□□□ -1.83
CTK3YML112W SEC15P22224 910 aa3.62□□□□□ -1.83
CTK3YML112W KCC4P25389 1037 aa3.62□□□□□ -1.83
CTK3YML112W YPT7P32939 208 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms