RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	SOV1	Q04748	898 aa		16.49	■□□□□ 0.23
CCC1	YLR220W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	16.49	■□□□□ 0.23	not detected
CCC1	YLR220W	EST1	P17214	699 aa	Predicted RBP	16.48	■□□□□ 0.23
CCC1	YLR220W	GAC1	P28006	793 aa		16.48	■□□□□ 0.23
CCC1	YLR220W	SEC9	P40357	651 aa		16.48	■□□□□ 0.23
CCC1	YLR220W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	16.48	■□□□□ 0.23	not detected
CCC1	YLR220W	YDR222W	Q04925	415 aa		16.48	■□□□□ 0.23
CCC1	YLR220W	TRE1	Q08919	783 aa		16.48	■□□□□ 0.23
CCC1	YLR220W	PRC1	P00729	532 aa		16.47	■□□□□ 0.23
CCC1	YLR220W	BI2	P03873	423 aa		16.47	■□□□□ 0.23
CCC1	YLR220W	BI4	P03879	638 aa		16.47	■□□□□ 0.23
CCC1	YLR220W	SAT4	P25333	603 aa	Known RBP	16.47	■□□□□ 0.23
CCC1	YLR220W	VPH1	P32563	840 aa	Known RBP	16.47	■□□□□ 0.23
CCC1	YLR220W	BCH2	P36122	765 aa		16.47	■□□□□ 0.23
CCC1	YLR220W	SHE3	P38272	425 aa	Known RBP	16.47	■□□□□ 0.23
CCC1	YLR220W	ERV41	Q04651	352 aa		16.47	■□□□□ 0.23
CCC1	YLR220W	MRI1	Q06489	411 aa	Known RBP	16.47	■□□□□ 0.23
CCC1	YLR220W	BI3	Q9ZZW7	517 aa		16.47	■□□□□ 0.23
CCC1	YLR220W	ATP1	P07251	545 aa	Known RBP	16.46	■□□□□ 0.23
CCC1	YLR220W	ERG11	P10614	530 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	MRP4	P32902	394 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	TCD1	P38756	429 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	FMP10	P40098	244 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	HOP2	P53187	214 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	BOP3	P53958	396 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	GPD1	Q00055	391 aa	Known RBP	16.46	■□□□□ 0.23
CCC1	YLR220W	MUB1	Q03162	620 aa		16.46	■□□□□ 0.23
CCC1	YLR220W	IDI1	P15496	288 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	SPT5	P27692	1063 aa	Known RBP	16.45	■□□□□ 0.22
CCC1	YLR220W	GCS1	P35197	352 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	BLI1	P35727	113 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	MMF1	P40185	145 aa	Known RBP	16.45	■□□□□ 0.22
CCC1	YLR220W	YGR111W	P53265	400 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	BTN2	P53286	410 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	HEH2	Q03281	663 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	YMR018W	Q04364	514 aa		16.45	■□□□□ 0.22
CCC1	YLR220W	PSY2	P40164	858 aa		16.44	■□□□□ 0.22
CCC1	YLR220W	APT1	P49435	187 aa	Known RBP	16.44	■□□□□ 0.22
CCC1	YLR220W	NUT1	P53114	1132 aa		16.44	■□□□□ 0.22
CCC1	YLR220W	NGL3	Q03210	505 aa		16.44	■□□□□ 0.22
CCC1	YLR220W	YML083C	Q04526	418 aa		16.44	■□□□□ 0.22
CCC1	YLR220W	APM4	Q99186	491 aa		16.44	■□□□□ 0.22
CCC1	YLR220W	TDA3	P38758	523 aa		16.43	■□□□□ 0.22
CCC1	YLR220W	CAJ1	P39101	391 aa		16.43	■□□□□ 0.22
CCC1	YLR220W	ADA2	Q02336	434 aa		16.43	■□□□□ 0.22
CCC1	YLR220W	YLR001C	Q07895	862 aa		16.43	■□□□□ 0.22
CCC1	YLR220W	JIP3	O13555	125 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	CKI1	P20485	582 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	SRB4	P32569	687 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	RRN6	P32786	894 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	YEL075C	P39972	122 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	INP52	P50942	1183 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	YNL011C	P53980	444 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	VAC14	Q06708	880 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	GPM2	Q12008	311 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	VPS54	Q12071	889 aa		16.42	■□□□□ 0.22
CCC1	YLR220W	ADE3	P07245	946 aa	Known RBP	16.41	■□□□□ 0.22
CCC1	YLR220W	TKL2	P33315	681 aa		16.41	■□□□□ 0.22
CCC1	YLR220W	YBL036C	P38197	257 aa		16.41	■□□□□ 0.22
CCC1	YLR220W	ASG7	P46993	209 aa		16.41	■□□□□ 0.22
CCC1	YLR220W	SLG1	P54867	378 aa		16.41	■□□□□ 0.22
CCC1	YLR220W	DIS3	Q08162	1001 aa	Known RBP	16.41	■□□□□ 0.22
CCC1	YLR220W	QNS1	P38795	714 aa	Known RBP	16.4	■□□□□ 0.22
CCC1	YLR220W	KAP114	P53067	1004 aa		16.4	■□□□□ 0.22
CCC1	YLR220W	YNL034W	P53963	612 aa		16.4	■□□□□ 0.22
CCC1	YLR220W	YNL018C	P53976	612 aa		16.4	■□□□□ 0.22
CCC1	YLR220W	SML1	Q04964	104 aa		16.4	■□□□□ 0.22
CCC1	YLR220W	TAF10	Q12030	206 aa		16.4	■□□□□ 0.22
CCC1	YLR220W	KGD2	P19262	463 aa	Predicted RBP	16.39	■□□□□ 0.21
CCC1	YLR220W	URK1	P27515	501 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	MET4	P32389	672 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	PEX2	P32800	271 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	ABZ1	P37254	787 aa	Predicted RBP	16.39	■□□□□ 0.21
CCC1	YLR220W	NCL1	P38205	684 aa	Known RBP	16.39	■□□□□ 0.21
CCC1	YLR220W	FAF1	P40546	346 aa	Predicted RBP	16.39	■□□□□ 0.21
CCC1	YLR220W	SNZ3	P43545	298 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	TAF1	P46677	1066 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	SNZ2	P53824	298 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	ARO80	Q04052	950 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	ESC2	Q06340	456 aa		16.39	■□□□□ 0.21
CCC1	YLR220W	RAD27	P26793	382 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	GYP6	P32806	458 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	RAD55	P38953	406 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	TGL3	P40308	642 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	ASG1	P40467	964 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	BFA1	P47113	574 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	SPO71	Q03868	1245 aa		16.38	■□□□□ 0.21
CCC1	YLR220W	SXM1	Q04175	944 aa	Known RBP	16.38	■□□□□ 0.21
CCC1	YLR220W	PET123	P17558	318 aa		16.37	■□□□□ 0.21
CCC1	YLR220W	VMA4	P22203	233 aa	Known RBP	16.37	■□□□□ 0.21
CCC1	YLR220W	CBR1	P38626	284 aa	Known RBP	16.37	■□□□□ 0.21
CCC1	YLR220W	SPC72	P39723	622 aa		16.37	■□□□□ 0.21
CCC1	YLR220W	YPL062W	Q02781	134 aa		16.37	■□□□□ 0.21
CCC1	YLR220W	ATG16	Q03818	150 aa		16.37	■□□□□ 0.21
CCC1	YLR220W	PUT4	P15380	627 aa		16.36	■□□□□ 0.21
CCC1	YLR220W	LRE1	P25579	583 aa	Known RBP	16.36	■□□□□ 0.21
CCC1	YLR220W	JJJ1	P53863	590 aa		16.36	■□□□□ 0.21
CCC1	YLR220W	DIG1	Q03063	452 aa	Known RBP	16.36	■□□□□ 0.21
CCC1	YLR220W	APC5	Q08683	685 aa		16.36	■□□□□ 0.21
CCC1	YLR220W	LEA1	Q08963	238 aa	Predicted RBP	16.36	■□□□□ 0.21

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms