RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C IWR1Q07532 353 aaPredicted RBP3.83□□□□□ -1.8
VPS53YJL029C MLH2Q07980 695 aa3.83□□□□□ -1.8
VPS53YJL029C LEA1Q08963 238 aaPredicted RBP3.83□□□□□ -1.8
VPS53YJL029C FAL1Q12099 399 aaKnown RBP3.83□□□□□ -1.8
VPS53YJL029C MTF1P14908 341 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C BET2P20133 325 aa3.82□□□□□ -1.8
VPS53YJL029C SAC6P32599 642 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C SHQ1P40486 507 aaPredicted RBP3.82□□□□□ -1.8
VPS53YJL029C YIR016WP40572 265 aa3.82□□□□□ -1.8
VPS53YJL029C STR2P47164 639 aa3.82□□□□□ -1.8
VPS53YJL029C ALT1P52893 592 aa3.82□□□□□ -1.8
VPS53YJL029C TUB4P53378 473 aa3.82□□□□□ -1.8
VPS53YJL029C SLG1P54867 378 aa3.82□□□□□ -1.8
VPS53YJL029C SPP382Q06411 708 aaPredicted RBP3.82□□□□□ -1.8
VPS53YJL029C YDL206WQ12424 762 aa3.82□□□□□ -1.8
VPS53YJL029C TRP2P00899 507 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C RPS3P05750 240 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C SPE1P08432 466 aa3.82□□□□□ -1.8
VPS53YJL029C GPA1P08539 472 aa3.82□□□□□ -1.8
VPS53YJL029C MAS1P10507 462 aa3.82□□□□□ -1.8
VPS53YJL029C RPL4AP10664 362 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C KEX2P13134 814 aa3.82□□□□□ -1.8
VPS53YJL029C CDC42P19073 191 aa3.82□□□□□ -1.8
VPS53YJL029C TKL2P33315 681 aa3.82□□□□□ -1.8
VPS53YJL029C MNR2P35724 969 aa3.82□□□□□ -1.8
VPS53YJL029C NOP4P37838 685 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C GGA2P38817 585 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C YER130CP39959 443 aa3.82□□□□□ -1.8
VPS53YJL029C DSE1P40077 573 aa3.82□□□□□ -1.8
VPS53YJL029C BTT1P40314 149 aaPredicted RBP3.82□□□□□ -1.8
VPS53YJL029C RPL34BP40525 121 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C MAF1P41910 395 aa3.82□□□□□ -1.8
VPS53YJL029C AIP1P46680 615 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C RPL4BP49626 362 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C KRE33P53914 1056 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C STE20Q03497 939 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C PPM1Q04081 328 aa3.82□□□□□ -1.8
VPS53YJL029C GFD1Q04839 188 aaKnown RBP3.82□□□□□ -1.8
VPS53YJL029C YLR297WQ05899 129 aa3.82□□□□□ -1.8
VPS53YJL029C IRC10Q08118 586 aa3.82□□□□□ -1.8
VPS53YJL029C SGO1Q08490 590 aa3.82□□□□□ -1.8
VPS53YJL029C CIR2Q08822 631 aa3.82□□□□□ -1.8
VPS53YJL029C YPR027CQ12079 277 aa3.82□□□□□ -1.8
VPS53YJL029C GAL10P04397 699 aa3.81□□□□□ -1.8
VPS53YJL029C GAC1P28006 793 aa3.81□□□□□ -1.8
VPS53YJL029C GCS1P35197 352 aa3.81□□□□□ -1.8
VPS53YJL029C ADE17P38009 592 aaKnown RBP3.81□□□□□ -1.8
VPS53YJL029C RRM3P38766 723 aa3.81□□□□□ -1.8
VPS53YJL029C SFB3P38810 929 aa3.81□□□□□ -1.8
VPS53YJL029C RRN7P40992 514 aa3.81□□□□□ -1.8
VPS53YJL029C ESBP6P53918 673 aa3.81□□□□□ -1.8
VPS53YJL029C MZM1Q03429 123 aaPredicted RBP3.81□□□□□ -1.8
VPS53YJL029C SNU56Q03782 492 aaKnown RBP3.81□□□□□ -1.8
VPS53YJL029C ERV41Q04651 352 aa3.81□□□□□ -1.8
VPS53YJL029C GPM2Q12008 311 aa3.81□□□□□ -1.8
VPS53YJL029C CHS1P08004 1131 aa3.81□□□□□ -1.8
VPS53YJL029C PPZ1P26570 692 aa3.81□□□□□ -1.8
VPS53YJL029C KIP1P28742 1111 aa3.81□□□□□ -1.8
VPS53YJL029C YKR051WP36142 418 aa3.81□□□□□ -1.8
VPS53YJL029C TGL4P36165 910 aa3.81□□□□□ -1.8
VPS53YJL029C TBS1P38114 1094 aa3.81□□□□□ -1.8
VPS53YJL029C RGA1P39083 1007 aa3.81□□□□□ -1.8
VPS53YJL029C RSM26P47141 266 aa3.81□□□□□ -1.8
VPS53YJL029C YGR237CP50089 785 aa3.81□□□□□ -1.8
VPS53YJL029C YGL081WP53156 320 aa3.81□□□□□ -1.8
VPS53YJL029C CEG1Q01159 459 aaPredicted RBP3.81□□□□□ -1.8
VPS53YJL029C NSE1Q07913 336 aa3.81□□□□□ -1.8
VPS53YJL029C FLC1Q08967 793 aa3.81□□□□□ -1.8
VPS53YJL029C RNR1P21524 888 aaKnown RBP3.8□□□□□ -1.8
VPS53YJL029C PUP3P25451 205 aaKnown RBP3.8□□□□□ -1.8
VPS53YJL029C GSY2P27472 705 aa3.8□□□□□ -1.8
VPS53YJL029C DSS4P32601 143 aa3.8□□□□□ -1.8
VPS53YJL029C FRE1P32791 686 aa3.8□□□□□ -1.8
VPS53YJL029C NEM1P38757 446 aa3.8□□□□□ -1.8
VPS53YJL029C TFG2P41896 400 aaPredicted RBP3.8□□□□□ -1.8
VPS53YJL029C GYP8P43570 497 aa3.8□□□□□ -1.8
VPS53YJL029C IES1P43579 692 aa3.8□□□□□ -1.8
VPS53YJL029C RSC1P53236 928 aa3.8□□□□□ -1.8
VPS53YJL029C CDD1Q06549 142 aa3.8□□□□□ -1.8
VPS53YJL029C YAP7Q08182 245 aa3.8□□□□□ -1.8
VPS53YJL029C MPD2Q99316 277 aa3.8□□□□□ -1.8
VPS53YJL029C AI5_BETAQ9ZZX0 354 aa3.8□□□□□ -1.8
VPS53YJL029C HIS5P07172 385 aa3.8□□□□□ -1.8
VPS53YJL029C CIT2P08679 460 aa3.8□□□□□ -1.8
VPS53YJL029C ARP1P38696 384 aa3.8□□□□□ -1.8
VPS53YJL029C NPR3P38742 1146 aa3.8□□□□□ -1.8
VPS53YJL029C CPR7P47103 393 aa3.8□□□□□ -1.8
VPS53YJL029C RGA2Q06407 1009 aa3.8□□□□□ -1.8
VPS53YJL029C YDL073WQ07454 984 aa3.8□□□□□ -1.8
VPS53YJL029C ABP140Q08641 628 aaKnown RBP3.8□□□□□ -1.8
VPS53YJL029C PEX34P25584 144 aa3.79□□□□□ -1.8
VPS53YJL029C MRC1P25588 1096 aa3.79□□□□□ -1.8
VPS53YJL029C RAD16P31244 790 aa3.79□□□□□ -1.8
VPS53YJL029C POL12P38121 705 aaPredicted RBP3.79□□□□□ -1.8
VPS53YJL029C ATG12P38316 186 aa3.79□□□□□ -1.8
VPS53YJL029C FHL1P39521 936 aa3.79□□□□□ -1.8
VPS53YJL029C MND1P53102 219 aa3.79□□□□□ -1.8
VPS53YJL029C EBS1Q03466 884 aaKnown RBP3.79□□□□□ -1.8
VPS53YJL029C HRT3Q12347 344 aa3.79□□□□□ -1.8
VPS53YJL029C PDH1Q12428 516 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms