RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W FHN1P53279 174 aa5.57□□□□□ -1.52
SEC28YIL076W SFL1P20134 766 aa5.56□□□□□ -1.52
SEC28YIL076W HCA4P20448 770 aaKnown RBP5.56□□□□□ -1.52
SEC28YIL076W CCR4P31384 837 aaKnown RBP5.56□□□□□ -1.52
SEC28YIL076W MNN4P36044 1178 aa5.56□□□□□ -1.52
SEC28YIL076W CCT7P42943 550 aaKnown RBP5.56□□□□□ -1.52
SEC28YIL076W COG8Q04632 607 aa5.56□□□□□ -1.52
SEC28YIL076W MLH3Q12083 715 aa5.56□□□□□ -1.52
SEC28YIL076W ECM3Q99252 613 aa5.56□□□□□ -1.52
SEC28YIL076W APN2P38207 520 aa5.55□□□□□ -1.52
SEC28YIL076W YNL195CP40168 261 aa5.55□□□□□ -1.52
SEC28YIL076W BRE5P53741 515 aaKnown RBP5.55□□□□□ -1.52
SEC28YIL076W LGE1Q02796 332 aaKnown RBP5.55□□□□□ -1.52
SEC28YIL076W TFB2Q02939 513 aa5.55□□□□□ -1.52
SEC28YIL076W GIN4Q12263 1142 aa5.55□□□□□ -1.52
SEC28YIL076W TAF3Q12297 353 aa5.55□□□□□ -1.52
SEC28YIL076W DMC1P25453 334 aa5.54□□□□□ -1.52
SEC28YIL076W PPZ2P33329 710 aa5.54□□□□□ -1.52
SEC28YIL076W CUE2P36075 443 aaKnown RBP5.54□□□□□ -1.52
SEC28YIL076W CRP1P38845 465 aaKnown RBP5.54□□□□□ -1.52
SEC28YIL076W SET2P46995 733 aaKnown RBP5.54□□□□□ -1.52
SEC28YIL076W NOP9P47077 666 aaKnown RBP5.54□□□□□ -1.52
SEC28YIL076W YLR001CQ07895 862 aa5.54□□□□□ -1.52
SEC28YIL076W ZRT2Q12436 422 aa5.54□□□□□ -1.52
SEC28YIL076W BNR1P40450 1375 aa5.54□□□□□ -1.52
SEC28YIL076W PEX1P24004 1043 aa5.53□□□□□ -1.52
SEC28YIL076W UBS1P38290 277 aa5.53□□□□□ -1.52
SEC28YIL076W SSZ1P38788 538 aaKnown RBP5.53□□□□□ -1.52
SEC28YIL076W ARG2P40360 574 aa5.53□□□□□ -1.52
SEC28YIL076W ALG12P53730 551 aa5.53□□□□□ -1.52
SEC28YIL076W THR1P17423 357 aaKnown RBP5.52□□□□□ -1.53
SEC28YIL076W PEX2P32800 271 aa5.52□□□□□ -1.53
SEC28YIL076W PPG1P32838 368 aa5.52□□□□□ -1.53
SEC28YIL076W RRP14P36080 434 aaKnown RBP5.52□□□□□ -1.53
SEC28YIL076W MET13P53128 600 aa5.52□□□□□ -1.53
SEC28YIL076W RNH70P53331 553 aa5.52□□□□□ -1.53
SEC28YIL076W DCS2Q12123 353 aa5.52□□□□□ -1.53
SEC28YIL076W USV1Q12132 391 aa5.52□□□□□ -1.53
SEC28YIL076W GLG1P36143 616 aa5.51□□□□□ -1.53
SEC28YIL076W BDH2P39713 417 aa5.51□□□□□ -1.53
SEC28YIL076W YIL166CP40445 542 aa5.51□□□□□ -1.53
SEC28YIL076W RSC8P43609 557 aaKnown RBP5.51□□□□□ -1.53
SEC28YIL076W YJR039WP47107 1121 aa5.51□□□□□ -1.53
SEC28YIL076W CTR1P49573 406 aa5.51□□□□□ -1.53
SEC28YIL076W ATG4P53867 494 aa5.51□□□□□ -1.53
SEC28YIL076W THI22Q06490 572 aa5.51□□□□□ -1.53
SEC28YIL076W CLF1Q12309 687 aaPredicted RBP5.51□□□□□ -1.53
SEC28YIL076W YNL193WP53870 558 aa5.5□□□□□ -1.53
SEC28YIL076W GUD1Q07729 489 aa5.5□□□□□ -1.53
SEC28YIL076W ISA1Q07821 250 aaPredicted RBP5.5□□□□□ -1.53
SEC28YIL076W DIA2Q08496 732 aaPredicted RBP5.5□□□□□ -1.53
SEC28YIL076W ADY2P25613 283 aa5.49□□□□□ -1.53
SEC28YIL076W EMP70P32802 667 aa5.49□□□□□ -1.53
SEC28YIL076W BCS1P32839 456 aa5.49□□□□□ -1.53
SEC28YIL076W SET3P36124 751 aa5.49□□□□□ -1.53
SEC28YIL076W AKL1P38080 1108 aaKnown RBP5.49□□□□□ -1.53
SEC28YIL076W RIX1P38883 763 aaPredicted RBP5.49□□□□□ -1.53
SEC28YIL076W YHR202WP38887 602 aa5.49□□□□□ -1.53
SEC28YIL076W BIT2P38346 545 aa5.48□□□□□ -1.53
SEC28YIL076W NUG1P40010 520 aaKnown RBP5.48□□□□□ -1.53
SEC28YIL076W TUB1P09733 447 aaKnown RBP5.47□□□□□ -1.53
SEC28YIL076W FLO10P36170 1169 aa5.47□□□□□ -1.53
SEC28YIL076W MGS1P40151 587 aa5.47□□□□□ -1.53
SEC28YIL076W PIG2P40187 538 aa5.47□□□□□ -1.53
SEC28YIL076W GPD1Q00055 391 aaKnown RBP5.47□□□□□ -1.53
SEC28YIL076W NOP14Q99207 810 aaKnown RBP5.47□□□□□ -1.53
SEC28YIL076W RPL8AP17076 256 aaKnown RBP5.46□□□□□ -1.54
SEC28YIL076W SPO11P23179 398 aa5.46□□□□□ -1.54
SEC28YIL076W SFP1P32432 683 aa5.46□□□□□ -1.54
SEC28YIL076W SEC6P32844 805 aa5.46□□□□□ -1.54
SEC28YIL076W SDA1P53313 767 aaKnown RBP5.46□□□□□ -1.54
SEC28YIL076W ORC1P54784 914 aaPredicted RBP5.46□□□□□ -1.54
SEC28YIL076W APM1Q00776 475 aaPredicted RBP5.46□□□□□ -1.54
SEC28YIL076W ARO10Q06408 635 aa5.46□□□□□ -1.54
SEC28YIL076W VPS36Q06696 566 aa5.46□□□□□ -1.54
SEC28YIL076W CHS5Q12114 671 aaKnown RBP5.46□□□□□ -1.54
SEC28YIL076W NDJ1Q12366 352 aa5.46□□□□□ -1.54
SEC28YIL076W ERG20P08524 352 aaKnown RBP5.45□□□□□ -1.54
SEC28YIL076W PRP28P23394 588 aa5.45□□□□□ -1.54
SEC28YIL076W IMG2P25642 146 aaPredicted RBP5.45□□□□□ -1.54
SEC28YIL076W FUB1P25659 250 aa5.45□□□□□ -1.54
SEC28YIL076W MNN1P39106 762 aa5.45□□□□□ -1.54
SEC28YIL076W YGR151CP53287 111 aa5.45□□□□□ -1.54
SEC28YIL076W VHS3Q08438 674 aa5.45□□□□□ -1.54
SEC28YIL076W FEN2P25621 512 aaKnown RBP5.44□□□□□ -1.54
SEC28YIL076W YKR075CP36155 307 aa5.44□□□□□ -1.54
SEC28YIL076W MAL31P38156 614 aa5.44□□□□□ -1.54
SEC28YIL076W BEM4P39011 633 aa5.44□□□□□ -1.54
SEC28YIL076W YEL020CP39994 560 aa5.44□□□□□ -1.54
SEC28YIL076W RFX1P48743 811 aa5.44□□□□□ -1.54
SEC28YIL076W ILV6P25605 309 aaKnown RBP5.43□□□□□ -1.54
SEC28YIL076W GMH1P36125 273 aa5.43□□□□□ -1.54
SEC28YIL076W YIL077CP40508 320 aa5.43□□□□□ -1.54
SEC28YIL076W IMO32P53219 342 aa5.43□□□□□ -1.54
SEC28YIL076W POM34Q12445 299 aa5.43□□□□□ -1.54
SEC28YIL076W RPN13O13563 156 aa5.42□□□□□ -1.54
SEC28YIL076W ABF1P14164 731 aa5.42□□□□□ -1.54
SEC28YIL076W FRS1P15624 595 aaKnown RBP5.42□□□□□ -1.54
SEC28YIL076W PET127P32606 800 aa5.42□□□□□ -1.54
SEC28YIL076W YHR097CP38809 366 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms