RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RPL4BP49626 362 aaKnown RBP2.97□□□□□ -1.93
PRE4YFR050C SPO1P53541 631 aa2.97□□□□□ -1.93
PRE4YFR050C ORC3P54790 616 aa2.97□□□□□ -1.93
PRE4YFR050C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
PRE4YFR050C SPP382Q06411 708 aaPredicted RBP2.97□□□□□ -1.93
PRE4YFR050C THI3Q07471 609 aa2.97□□□□□ -1.93
PRE4YFR050C RCL1Q08096 367 aaPredicted RBP2.97□□□□□ -1.93
PRE4YFR050C GNT1Q12096 491 aa2.97□□□□□ -1.93
PRE4YFR050C FAL1Q12099 399 aaKnown RBP2.97□□□□□ -1.93
PRE4YFR050C YOR097CQ12274 175 aaPredicted RBP2.97□□□□□ -1.93
PRE4YFR050C SEC3P33332 1336 aaKnown RBP2.96□□□□□ -1.93
PRE4YFR050C UTR4P32626 227 aa2.96□□□□□ -1.94
PRE4YFR050C DUT1P33317 147 aa2.96□□□□□ -1.94
PRE4YFR050C SLX1P38324 304 aa2.96□□□□□ -1.94
PRE4YFR050C MPH1P40562 993 aa2.96□□□□□ -1.94
PRE4YFR050C YFL052WP43551 465 aa2.96□□□□□ -1.94
PRE4YFR050C IGO1P53897 168 aa2.96□□□□□ -1.94
PRE4YFR050C SFB2P53953 876 aa2.96□□□□□ -1.94
PRE4YFR050C EEB1Q02891 456 aa2.96□□□□□ -1.94
PRE4YFR050C RKM4Q12504 494 aa2.96□□□□□ -1.94
PRE4YFR050C SNF5P18480 905 aa2.95□□□□□ -1.94
PRE4YFR050C BAS1P22035 811 aa2.95□□□□□ -1.94
PRE4YFR050C RNQ1P25367 405 aa2.95□□□□□ -1.94
PRE4YFR050C ELM1P32801 640 aa2.95□□□□□ -1.94
PRE4YFR050C BAP2P38084 609 aa2.95□□□□□ -1.94
PRE4YFR050C FLR1P38124 548 aa2.95□□□□□ -1.94
PRE4YFR050C APN2P38207 520 aa2.95□□□□□ -1.94
PRE4YFR050C SEC26P41810 973 aaKnown RBP2.95□□□□□ -1.94
PRE4YFR050C YGL176CP46945 554 aa2.95□□□□□ -1.94
PRE4YFR050C NOP7P53261 605 aaKnown RBP2.95□□□□□ -1.94
PRE4YFR050C SNO2P53823 222 aa2.95□□□□□ -1.94
PRE4YFR050C VPS16Q03308 798 aa2.95□□□□□ -1.94
PRE4YFR050C SLD5Q03406 294 aa2.95□□□□□ -1.94
PRE4YFR050C YML037CQ03703 340 aa2.95□□□□□ -1.94
PRE4YFR050C TMN2Q04562 672 aa2.95□□□□□ -1.94
PRE4YFR050C YPL066WQ12194 479 aa2.95□□□□□ -1.94
PRE4YFR050C SUL2Q12325 893 aa2.95□□□□□ -1.94
PRE4YFR050C LAM4P38800 1345 aa2.94□□□□□ -1.94
PRE4YFR050C RPL11AP0C0W9 174 aaKnown RBP2.94□□□□□ -1.94
PRE4YFR050C RFC5P38251 354 aa2.94□□□□□ -1.94
PRE4YFR050C VAC8P39968 578 aa2.94□□□□□ -1.94
PRE4YFR050C YIR016WP40572 265 aa2.94□□□□□ -1.94
PRE4YFR050C YFL054CP43549 646 aa2.94□□□□□ -1.94
PRE4YFR050C DSD1P53095 428 aa2.94□□□□□ -1.94
PRE4YFR050C YGR053CP53234 283 aa2.94□□□□□ -1.94
PRE4YFR050C YGR125WP53273 1036 aa2.94□□□□□ -1.94
PRE4YFR050C MRPL22P53881 309 aa2.94□□□□□ -1.94
PRE4YFR050C CTF4Q01454 927 aa2.94□□□□□ -1.94
PRE4YFR050C NUP116Q02630 1113 aa2.94□□□□□ -1.94
PRE4YFR050C RSM24Q03976 319 aa2.94□□□□□ -1.94
PRE4YFR050C ACM1Q08981 209 aa2.94□□□□□ -1.94
PRE4YFR050C RPL11BQ3E757 174 aaPredicted RBP2.94□□□□□ -1.94
PRE4YFR050C YIL046W-AQ3E7Z4 54 aa2.94□□□□□ -1.94
PRE4YFR050C DUR1,2P32528 1835 aaKnown RBP2.93□□□□□ -1.94
PRE4YFR050C PRI2P20457 528 aa2.93□□□□□ -1.94
PRE4YFR050C FUB1P25659 250 aa2.93□□□□□ -1.94
PRE4YFR050C ABD1P32783 436 aaPredicted RBP2.93□□□□□ -1.94
PRE4YFR050C RPT3P33298 428 aaKnown RBP2.93□□□□□ -1.94
PRE4YFR050C ALD6P54115 500 aaKnown RBP2.93□□□□□ -1.94
PRE4YFR050C YHM2Q04013 314 aa2.93□□□□□ -1.94
PRE4YFR050C YMR321CQ04898 105 aa2.93□□□□□ -1.94
PRE4YFR050C ESC2Q06340 456 aa2.93□□□□□ -1.94
PRE4YFR050C ISA1Q07821 250 aaPredicted RBP2.93□□□□□ -1.94
PRE4YFR050C SVS1Q12254 260 aa2.93□□□□□ -1.94
PRE4YFR050C YDL177CQ12257 170 aa2.93□□□□□ -1.94
PRE4YFR050C CYC1P00044 109 aaPredicted RBP2.92□□□□□ -1.94
PRE4YFR050C IPP1P00817 287 aaKnown RBP2.92□□□□□ -1.94
PRE4YFR050C MAS2P11914 482 aa2.92□□□□□ -1.94
PRE4YFR050C KIN2P13186 1147 aaKnown RBP2.92□□□□□ -1.94
PRE4YFR050C APL1P27351 700 aa2.92□□□□□ -1.94
PRE4YFR050C PIN4P34217 668 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
PRE4YFR050C DBP7P36120 742 aaKnown RBP2.92□□□□□ -1.94
PRE4YFR050C PCA1P38360 1216 aa2.92□□□□□ -1.94
PRE4YFR050C RIM4P38741 713 aa2.92□□□□□ -1.94
PRE4YFR050C PCF11P39081 626 aaPredicted RBP2.92□□□□□ -1.94
PRE4YFR050C GEM1P39722 662 aa2.92□□□□□ -1.94
PRE4YFR050C YLR455WQ06188 304 aa2.92□□□□□ -1.94
PRE4YFR050C TRM11Q12463 433 aa2.92□□□□□ -1.94
PRE4YFR050C ATG11Q12527 1178 aa2.92□□□□□ -1.94
PRE4YFR050C BI4P03879 638 aa2.91□□□□□ -1.94
PRE4YFR050C SNA3P14359 133 aa2.91□□□□□ -1.94
PRE4YFR050C CMP2P14747 604 aa2.91□□□□□ -1.94
PRE4YFR050C SBA1P28707 216 aaKnown RBP2.91□□□□□ -1.94
PRE4YFR050C AIM3P38266 947 aaKnown RBP2.91□□□□□ -1.94
PRE4YFR050C YBR238CP38330 731 aaKnown RBP2.91□□□□□ -1.94
PRE4YFR050C TIF4631P39935 952 aaKnown RBP2.91□□□□□ -1.94
PRE4YFR050C MSC2Q03455 724 aa2.91□□□□□ -1.94
PRE4YFR050C HIM1Q06674 414 aa2.91□□□□□ -1.94
PRE4YFR050C CDA2Q06703 312 aa2.91□□□□□ -1.94
PRE4YFR050C OPI10Q08202 246 aa2.91□□□□□ -1.94
PRE4YFR050C ERP3Q12403 225 aa2.91□□□□□ -1.94
PRE4YFR050C SUP35P05453 685 aaKnown RBP2.9□□□□□ -1.95
PRE4YFR050C RPS13P05756 151 aaKnown RBP2.9□□□□□ -1.95
PRE4YFR050C AGP1P25376 633 aa2.9□□□□□ -1.95
PRE4YFR050C KCC4P25389 1037 aa2.9□□□□□ -1.95
PRE4YFR050C ADK2P26364 225 aa2.9□□□□□ -1.95
PRE4YFR050C SLA2P33338 968 aa2.9□□□□□ -1.95
PRE4YFR050C TSA1P34760 196 aaKnown RBP2.9□□□□□ -1.95
PRE4YFR050C MPE1P35728 441 aaKnown RBP2.9□□□□□ -1.95
PRE4YFR050C UBX6P47049 396 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms