RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W GEA1P47102 1408 aaPredicted RBP3.95□□□□□ -1.78
RPN3YER021W YEL1P34225 687 aa3.95□□□□□ -1.78
RPN3YER021W FPR3P38911 411 aaKnown RBP3.95□□□□□ -1.78
RPN3YER021W YJR142WP47173 342 aa3.95□□□□□ -1.78
RPN3YER021W UTP14Q04500 899 aaKnown RBP3.95□□□□□ -1.78
RPN3YER021W TRM11Q12463 433 aa3.95□□□□□ -1.78
RPN3YER021W YLR149CQ99296 730 aa3.95□□□□□ -1.78
RPN3YER021W Q0142Q9ZZW4 58 aa3.95□□□□□ -1.78
RPN3YER021W TRP4P07285 380 aaPredicted RBP3.94□□□□□ -1.78
RPN3YER021W SFL1P20134 766 aa3.94□□□□□ -1.78
RPN3YER021W SFP1P32432 683 aa3.94□□□□□ -1.78
RPN3YER021W DEF1P35732 738 aaKnown RBP3.94□□□□□ -1.78
RPN3YER021W YKR051WP36142 418 aa3.94□□□□□ -1.78
RPN3YER021W BRN1P38170 754 aa3.94□□□□□ -1.78
RPN3YER021W PCM1P38628 557 aaKnown RBP3.94□□□□□ -1.78
RPN3YER021W RPP1P38786 293 aa3.94□□□□□ -1.78
RPN3YER021W BNA2P47125 453 aa3.94□□□□□ -1.78
RPN3YER021W AIM14P53109 570 aa3.94□□□□□ -1.78
RPN3YER021W PKH1Q03407 766 aa3.94□□□□□ -1.78
RPN3YER021W ATG33Q06485 197 aa3.94□□□□□ -1.78
RPN3YER021W ADR1P07248 1323 aa3.94□□□□□ -1.78
RPN3YER021W HMG1P12683 1054 aa3.93□□□□□ -1.78
RPN3YER021W TRM2P33753 639 aa3.93□□□□□ -1.78
RPN3YER021W TYS1P36421 394 aaKnown RBP3.93□□□□□ -1.78
RPN3YER021W YFL052WP43551 465 aa3.93□□□□□ -1.78
RPN3YER021W MTR3P48240 250 aaPredicted RBP3.93□□□□□ -1.78
RPN3YER021W UBC9P50623 157 aaPredicted RBP3.93□□□□□ -1.78
RPN3YER021W NPY1P53164 384 aa3.93□□□□□ -1.78
RPN3YER021W COG8Q04632 607 aa3.93□□□□□ -1.78
RPN3YER021W IMH1Q06704 911 aaKnown RBP3.93□□□□□ -1.78
RPN3YER021W YLR415CO13578 112 aa3.93□□□□□ -1.78
RPN3YER021W HRR25P29295 494 aaKnown RBP3.93□□□□□ -1.78
RPN3YER021W PMI40P29952 429 aaKnown RBP3.93□□□□□ -1.78
RPN3YER021W HSL7P38274 827 aa3.93□□□□□ -1.78
RPN3YER021W SIC1P38634 284 aa3.93□□□□□ -1.78
RPN3YER021W MET13P53128 600 aa3.93□□□□□ -1.78
RPN3YER021W TRM13Q12383 476 aa3.93□□□□□ -1.78
RPN3YER021W RRP5Q05022 1729 aaKnown RBP3.92□□□□□ -1.78
RPN3YER021W MGS1P40151 587 aa3.92□□□□□ -1.78
RPN3YER021W KIN4Q01919 800 aa3.92□□□□□ -1.78
RPN3YER021W RPN7Q06103 429 aaKnown RBP3.92□□□□□ -1.78
RPN3YER021W GIN4Q12263 1142 aa3.92□□□□□ -1.78
RPN3YER021W ENT1Q12518 454 aa3.92□□□□□ -1.78
RPN3YER021W YGR161W-CQ3E744 92 aa3.92□□□□□ -1.78
RPN3YER021W TUB2P02557 457 aaKnown RBP3.91□□□□□ -1.78
RPN3YER021W EFT1P32324 842 aaKnown RBP3.91□□□□□ -1.78
RPN3YER021W NGG1P32494 702 aa3.91□□□□□ -1.78
RPN3YER021W YKR018CP36114 725 aa3.91□□□□□ -1.78
RPN3YER021W DOT6P40059 670 aaKnown RBP3.91□□□□□ -1.78
RPN3YER021W FKH2P41813 862 aa3.91□□□□□ -1.78
RPN3YER021W SDA1P53313 767 aaKnown RBP3.91□□□□□ -1.78
RPN3YER021W SUN4P53616 420 aa3.91□□□□□ -1.78
RPN3YER021W YLR040CQ07988 224 aa3.91□□□□□ -1.78
RPN3YER021W AIM39Q08223 395 aa3.91□□□□□ -1.78
RPN3YER021W PNS1Q12412 539 aa3.91□□□□□ -1.78
RPN3YER021W GCN2P15442 1659 aa3.91□□□□□ -1.78
RPN3YER021W SRB8P25648 1427 aa3.9□□□□□ -1.78
RPN3YER021W CCR4P31384 837 aaKnown RBP3.9□□□□□ -1.78
RPN3YER021W MIP6P38760 659 aaKnown RBP3.9□□□□□ -1.78
RPN3YER021W ARP4P80428 489 aa3.9□□□□□ -1.78
RPN3YER021W NRG1Q03125 231 aa3.9□□□□□ -1.78
RPN3YER021W CFT1Q06632 1357 aaKnown RBP3.9□□□□□ -1.79
RPN3YER021W ERG4P25340 473 aa3.89□□□□□ -1.79
RPN3YER021W AIM21P40563 679 aa3.89□□□□□ -1.79
RPN3YER021W HLJ1P48353 224 aa3.89□□□□□ -1.79
RPN3YER021W MSE1P48525 536 aa3.89□□□□□ -1.79
RPN3YER021W PCL10P53124 433 aa3.89□□□□□ -1.79
RPN3YER021W YNR029CP53729 429 aaKnown RBP3.89□□□□□ -1.79
RPN3YER021W GUD1Q07729 489 aa3.89□□□□□ -1.79
RPN3YER021W TGL5Q12043 749 aa3.89□□□□□ -1.79
RPN3YER021W PUS9Q12069 462 aa3.89□□□□□ -1.79
RPN3YER021W MNN4P36044 1178 aa3.89□□□□□ -1.79
RPN3YER021W KTR4P38131 464 aa3.89□□□□□ -1.79
RPN3YER021W YBR259WP38338 688 aa3.89□□□□□ -1.79
RPN3YER021W PRP31P49704 494 aaPredicted RBP3.89□□□□□ -1.79
RPN3YER021W DLT1Q04216 342 aa3.89□□□□□ -1.79
RPN3YER021W THI73Q07904 523 aa3.89□□□□□ -1.79
RPN3YER021W KRE5P22023 1365 aa3.88□□□□□ -1.79
RPN3YER021W EDE1P34216 1381 aa3.88□□□□□ -1.79
RPN3YER021W MET3P08536 511 aa3.88□□□□□ -1.79
RPN3YER021W ADE2P21264 571 aaKnown RBP3.88□□□□□ -1.79
RPN3YER021W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
RPN3YER021W YBR053CP38235 358 aa3.88□□□□□ -1.79
RPN3YER021W CRP1P38845 465 aaKnown RBP3.88□□□□□ -1.79
RPN3YER021W ELO3P40319 345 aa3.88□□□□□ -1.79
RPN3YER021W MUP1P50276 574 aa3.88□□□□□ -1.79
RPN3YER021W YBP2P53169 641 aa3.88□□□□□ -1.79
RPN3YER021W ORC4P54791 529 aa3.88□□□□□ -1.79
RPN3YER021W LEE1Q02799 301 aaKnown RBP3.88□□□□□ -1.79
RPN3YER021W NUP192P47054 1683 aa3.87□□□□□ -1.79
RPN3YER021W CAF20P12962 161 aaKnown RBP3.87□□□□□ -1.79
RPN3YER021W SUL1P38359 859 aa3.87□□□□□ -1.79
RPN3YER021W CHS7P38843 316 aa3.87□□□□□ -1.79
RPN3YER021W ECM1P39715 212 aa3.87□□□□□ -1.79
RPN3YER021W YJR096WP47137 282 aa3.87□□□□□ -1.79
RPN3YER021W TEX1P53851 422 aaKnown RBP3.87□□□□□ -1.79
RPN3YER021W YOL073CQ08232 322 aa3.87□□□□□ -1.79
RPN3YER021W FRE5Q08908 694 aa3.87□□□□□ -1.79
RPN3YER021W DCS2Q12123 353 aa3.87□□□□□ -1.79
RPN3YER021W LAT1P12695 482 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms