RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	ATG33	Q06485	197 aa		5.06	□□□□□ -1.6
APM3	YBR288C	TAF3	Q12297	353 aa		5.06	□□□□□ -1.6
APM3	YBR288C	ZRT2	Q12436	422 aa		5.06	□□□□□ -1.6
APM3	YBR288C	PCL2	P25693	308 aa		5.05	□□□□□ -1.6
APM3	YBR288C	RIX1	P38883	763 aa	Predicted RBP	5.05	□□□□□ -1.6
APM3	YBR288C	GID8	P40208	455 aa		5.05	□□□□□ -1.6
APM3	YBR288C	ARG2	P40360	574 aa		5.05	□□□□□ -1.6
APM3	YBR288C	YIL166C	P40445	542 aa		5.05	□□□□□ -1.6
APM3	YBR288C	OSW7	P43611	510 aa		5.05	□□□□□ -1.6
APM3	YBR288C	CTR1	P49573	406 aa		5.05	□□□□□ -1.6
APM3	YBR288C	NTG2	Q08214	380 aa		5.05	□□□□□ -1.6
APM3	YBR288C	HMG1	P12683	1054 aa		5.04	□□□□□ -1.6
APM3	YBR288C	MNN4	P36044	1178 aa		5.04	□□□□□ -1.6
APM3	YBR288C	GLG1	P36143	616 aa		5.04	□□□□□ -1.6
APM3	YBR288C	CRP1	P38845	465 aa	Known RBP	5.04	□□□□□ -1.6
APM3	YBR288C	YNL195C	P40168	261 aa		5.04	□□□□□ -1.6
APM3	YBR288C	NOP9	P47077	666 aa	Known RBP	5.04	□□□□□ -1.6
APM3	YBR288C	POB3	Q04636	552 aa	Known RBP	5.04	□□□□□ -1.6
APM3	YBR288C	NDJ1	Q12366	352 aa		5.04	□□□□□ -1.6
APM3	YBR288C	ECM3	Q99252	613 aa		5.04	□□□□□ -1.6
APM3	YBR288C	TUB1	P09733	447 aa	Known RBP	5.03	□□□□□ -1.6
APM3	YBR288C	PEX1	P24004	1043 aa		5.03	□□□□□ -1.6
APM3	YBR288C	EMP70	P32802	667 aa		5.03	□□□□□ -1.6
APM3	YBR288C	BRE5	P53741	515 aa	Known RBP	5.03	□□□□□ -1.6
APM3	YBR288C	ATG4	P53867	494 aa		5.03	□□□□□ -1.6
APM3	YBR288C	SFL1	P20134	766 aa		5.02	□□□□□ -1.61
APM3	YBR288C	FLO10	P36170	1169 aa		5.02	□□□□□ -1.61
APM3	YBR288C	APN2	P38207	520 aa		5.02	□□□□□ -1.61
APM3	YBR288C	SET2	P46995	733 aa	Known RBP	5.02	□□□□□ -1.61
APM3	YBR288C	COG8	Q04632	607 aa		5.02	□□□□□ -1.61
APM3	YBR288C	USV1	Q12132	391 aa		5.02	□□□□□ -1.61
APM3	YBR288C	GIN4	Q12263	1142 aa		5.02	□□□□□ -1.61
APM3	YBR288C	THR1	P17423	357 aa	Known RBP	5.01	□□□□□ -1.61
APM3	YBR288C	ADY2	P25613	283 aa		5.01	□□□□□ -1.61
APM3	YBR288C	CCR4	P31384	837 aa	Known RBP	5.01	□□□□□ -1.61
APM3	YBR288C	YEL1	P34225	687 aa		5.01	□□□□□ -1.61
APM3	YBR288C	PCM1	P38628	557 aa	Known RBP	5.01	□□□□□ -1.61
APM3	YBR288C	BDH2	P39713	417 aa		5.01	□□□□□ -1.61
APM3	YBR288C	RSC8	P43609	557 aa	Known RBP	5	□□□□□ -1.61
APM3	YBR288C	ARO10	Q06408	635 aa		5	□□□□□ -1.61
APM3	YBR288C	DIA2	Q08496	732 aa	Predicted RBP	5	□□□□□ -1.61
APM3	YBR288C	YTA7	P40340	1379 aa		5	□□□□□ -1.61
APM3	YBR288C	SSZ1	P38788	538 aa	Known RBP	5	□□□□□ -1.61
APM3	YBR288C	APM1	Q00776	475 aa	Predicted RBP	5	□□□□□ -1.61
APM3	YBR288C	THI22	Q06490	572 aa		5	□□□□□ -1.61
APM3	YBR288C	CLF1	Q12309	687 aa	Predicted RBP	5	□□□□□ -1.61
APM3	YBR288C	SPO11	P23179	398 aa		4.99	□□□□□ -1.61
APM3	YBR288C	BCS1	P32839	456 aa		4.99	□□□□□ -1.61
APM3	YBR288C	SET3	P36124	751 aa		4.99	□□□□□ -1.61
APM3	YBR288C	IMO32	P53219	342 aa		4.99	□□□□□ -1.61
APM3	YBR288C	ISA1	Q07821	250 aa	Predicted RBP	4.99	□□□□□ -1.61
APM3	YBR288C	ILV6	P25605	309 aa	Known RBP	4.98	□□□□□ -1.61
APM3	YBR288C	AKL1	P38080	1108 aa	Known RBP	4.98	□□□□□ -1.61
APM3	YBR288C	YEL020C	P39994	560 aa		4.98	□□□□□ -1.61
APM3	YBR288C	TFB2	Q02939	513 aa		4.98	□□□□□ -1.61
APM3	YBR288C	YLR001C	Q07895	862 aa		4.98	□□□□□ -1.61
APM3	YBR288C	DCS2	Q12123	353 aa		4.98	□□□□□ -1.61
APM3	YBR288C	FUB1	P25659	250 aa		4.97	□□□□□ -1.61
APM3	YBR288C	BIT2	P38346	545 aa		4.97	□□□□□ -1.61
APM3	YBR288C	YHR202W	P38887	602 aa		4.97	□□□□□ -1.61
APM3	YBR288C	PIG2	P40187	538 aa		4.97	□□□□□ -1.61
APM3	YBR288C	YJR039W	P47107	1121 aa		4.97	□□□□□ -1.61
APM3	YBR288C	MET13	P53128	600 aa		4.97	□□□□□ -1.61
APM3	YBR288C	FPR4	Q06205	392 aa	Predicted RBP	4.97	□□□□□ -1.61
APM3	YBR288C	GPD1	Q00055	391 aa	Known RBP	4.96	□□□□□ -1.62
APM3	YBR288C	RPN13	O13563	156 aa		4.95	□□□□□ -1.62
APM3	YBR288C	PRP28	P23394	588 aa		4.95	□□□□□ -1.62
APM3	YBR288C	NUG1	P40010	520 aa	Known RBP	4.95	□□□□□ -1.62
APM3	YBR288C	YGR151C	P53287	111 aa		4.95	□□□□□ -1.62
APM3	YBR288C	YNL193W	P53870	558 aa		4.95	□□□□□ -1.62
APM3	YBR288C	GUD1	Q07729	489 aa		4.95	□□□□□ -1.62
APM3	YBR288C	CHS5	Q12114	671 aa	Known RBP	4.95	□□□□□ -1.62
APM3	YBR288C	FEN2	P25621	512 aa	Known RBP	4.94	□□□□□ -1.62
APM3	YBR288C	SEC6	P32844	805 aa		4.94	□□□□□ -1.62
APM3	YBR288C	GMH1	P36125	273 aa		4.94	□□□□□ -1.62
APM3	YBR288C	COQ11	Q05892	277 aa		4.94	□□□□□ -1.62
APM3	YBR288C	VPS36	Q06696	566 aa		4.94	□□□□□ -1.62
APM3	YBR288C	ABF1	P14164	731 aa		4.94	□□□□□ -1.62
APM3	YBR288C	YHR097C	P38809	366 aa	Known RBP	4.94	□□□□□ -1.62
APM3	YBR288C	YIL077C	P40508	320 aa		4.94	□□□□□ -1.62
APM3	YBR288C	RFX1	P48743	811 aa		4.94	□□□□□ -1.62
APM3	YBR288C	YDL086W	Q07505	273 aa		4.94	□□□□□ -1.62
APM3	YBR288C	VHS3	Q08438	674 aa		4.94	□□□□□ -1.62
APM3	YBR288C	YNL162W-A	Q3E7A8	72 aa		4.94	□□□□□ -1.62
APM3	YBR288C	PPG1	P32838	368 aa		4.93	□□□□□ -1.62
APM3	YBR288C	KSP1	P38691	1029 aa	Known RBP	4.93	□□□□□ -1.62
APM3	YBR288C	MPS3	P47069	682 aa		4.93	□□□□□ -1.62
APM3	YBR288C	RNH70	P53331	553 aa		4.93	□□□□□ -1.62
APM3	YBR288C	SPC98	P53540	846 aa		4.93	□□□□□ -1.62
APM3	YBR288C	ALG12	P53730	551 aa		4.93	□□□□□ -1.62
APM3	YBR288C	THI7	Q05998	598 aa		4.93	□□□□□ -1.62
APM3	YBR288C	POM34	Q12445	299 aa		4.93	□□□□□ -1.62
APM3	YBR288C	ERG20	P08524	352 aa	Known RBP	4.92	□□□□□ -1.62
APM3	YBR288C	MDM10	P18409	493 aa		4.92	□□□□□ -1.62
APM3	YBR288C	KCC4	P25389	1037 aa		4.92	□□□□□ -1.62
APM3	YBR288C	RRP14	P36080	434 aa	Known RBP	4.92	□□□□□ -1.62
APM3	YBR288C	YKR075C	P36155	307 aa		4.92	□□□□□ -1.62
APM3	YBR288C	NMA2	P53204	395 aa		4.92	□□□□□ -1.62
APM3	YBR288C	ORC1	P54784	914 aa	Predicted RBP	4.92	□□□□□ -1.62
APM3	YBR288C	IMG2	P25642	146 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms