RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	YEL1	P34225	687 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	YJL206C	P39529	758 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	YNL195C	P40168	261 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	ATF1	P40353	525 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	CCT7	P42943	550 aa	Known RBP	5.78	□□□□□ -1.48
RTG3	YBL103C	BRE5	P53741	515 aa	Known RBP	5.78	□□□□□ -1.48
RTG3	YBL103C	COG8	Q04632	607 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	MLH3	Q12083	715 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	ECM3	Q99252	613 aa		5.78	□□□□□ -1.48
RTG3	YBL103C	HCA4	P20448	770 aa	Known RBP	5.77	□□□□□ -1.49
RTG3	YBL103C	CCR4	P31384	837 aa	Known RBP	5.77	□□□□□ -1.49
RTG3	YBL103C	UBS1	P38290	277 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	NOP9	P47077	666 aa	Known RBP	5.77	□□□□□ -1.49
RTG3	YBL103C	FHN1	P53279	174 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	LGE1	Q02796	332 aa	Known RBP	5.77	□□□□□ -1.49
RTG3	YBL103C	TFB2	Q02939	513 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	ZRT2	Q12436	422 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	PPZ2	P33329	710 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	CRP1	P38845	465 aa	Known RBP	5.77	□□□□□ -1.49
RTG3	YBL103C	SET2	P46995	733 aa	Known RBP	5.77	□□□□□ -1.49
RTG3	YBL103C	RNH70	P53331	553 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	YLR001C	Q07895	862 aa		5.77	□□□□□ -1.49
RTG3	YBL103C	PEX1	P24004	1043 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	PPG1	P32838	368 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	CUE2	P36075	443 aa	Known RBP	5.76	□□□□□ -1.49
RTG3	YBL103C	APN2	P38207	520 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	CTR1	P49573	406 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	MET13	P53128	600 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	ALG12	P53730	551 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	TAF3	Q12297	353 aa		5.76	□□□□□ -1.49
RTG3	YBL103C	DMC1	P25453	334 aa		5.75	□□□□□ -1.49
RTG3	YBL103C	PEX2	P32800	271 aa		5.75	□□□□□ -1.49
RTG3	YBL103C	SSZ1	P38788	538 aa	Known RBP	5.75	□□□□□ -1.49
RTG3	YBL103C	ARG2	P40360	574 aa		5.75	□□□□□ -1.49
RTG3	YBL103C	YNL193W	P53870	558 aa		5.75	□□□□□ -1.49
RTG3	YBL103C	BNR1	P40450	1375 aa		5.75	□□□□□ -1.49
RTG3	YBL103C	GLG1	P36143	616 aa		5.74	□□□□□ -1.49
RTG3	YBL103C	RSC8	P43609	557 aa	Known RBP	5.74	□□□□□ -1.49
RTG3	YBL103C	ATG4	P53867	494 aa		5.74	□□□□□ -1.49
RTG3	YBL103C	DCS2	Q12123	353 aa		5.74	□□□□□ -1.49
RTG3	YBL103C	USV1	Q12132	391 aa		5.74	□□□□□ -1.49
RTG3	YBL103C	THR1	P17423	357 aa	Known RBP	5.73	□□□□□ -1.49
RTG3	YBL103C	RRP14	P36080	434 aa	Known RBP	5.73	□□□□□ -1.49
RTG3	YBL103C	ISA1	Q07821	250 aa	Predicted RBP	5.73	□□□□□ -1.49
RTG3	YBL103C	DIA2	Q08496	732 aa	Predicted RBP	5.73	□□□□□ -1.49
RTG3	YBL103C	EMP70	P32802	667 aa		5.72	□□□□□ -1.49
RTG3	YBL103C	AKL1	P38080	1108 aa	Known RBP	5.72	□□□□□ -1.49
RTG3	YBL103C	RIX1	P38883	763 aa	Predicted RBP	5.72	□□□□□ -1.49
RTG3	YBL103C	YHR202W	P38887	602 aa		5.72	□□□□□ -1.49
RTG3	YBL103C	YIL166C	P40445	542 aa		5.72	□□□□□ -1.49
RTG3	YBL103C	YJR039W	P47107	1121 aa		5.72	□□□□□ -1.49
RTG3	YBL103C	THI22	Q06490	572 aa		5.72	□□□□□ -1.49
RTG3	YBL103C	GUD1	Q07729	489 aa		5.72	□□□□□ -1.49
RTG3	YBL103C	BCS1	P32839	456 aa		5.71	□□□□□ -1.49
RTG3	YBL103C	SET3	P36124	751 aa		5.71	□□□□□ -1.5
RTG3	YBL103C	BDH2	P39713	417 aa		5.71	□□□□□ -1.5
RTG3	YBL103C	NUG1	P40010	520 aa	Known RBP	5.71	□□□□□ -1.5
RTG3	YBL103C	GPD1	Q00055	391 aa	Known RBP	5.71	□□□□□ -1.5
RTG3	YBL103C	TUB1	P09733	447 aa	Known RBP	5.7	□□□□□ -1.5
RTG3	YBL103C	RPL8A	P17076	256 aa	Known RBP	5.7	□□□□□ -1.5
RTG3	YBL103C	FLO10	P36170	1169 aa		5.7	□□□□□ -1.5
RTG3	YBL103C	BIT2	P38346	545 aa		5.7	□□□□□ -1.5
RTG3	YBL103C	CLF1	Q12309	687 aa	Predicted RBP	5.7	□□□□□ -1.5
RTG3	YBL103C	NOP14	Q99207	810 aa	Known RBP	5.7	□□□□□ -1.5
RTG3	YBL103C	ADY2	P25613	283 aa		5.69	□□□□□ -1.5
RTG3	YBL103C	VPS36	Q06696	566 aa		5.69	□□□□□ -1.5
RTG3	YBL103C	NDJ1	Q12366	352 aa		5.69	□□□□□ -1.5
RTG3	YBL103C	SFP1	P32432	683 aa		5.68	□□□□□ -1.5
RTG3	YBL103C	PIG2	P40187	538 aa		5.68	□□□□□ -1.5
RTG3	YBL103C	SDA1	P53313	767 aa	Known RBP	5.68	□□□□□ -1.5
RTG3	YBL103C	ORC1	P54784	914 aa	Predicted RBP	5.68	□□□□□ -1.5
RTG3	YBL103C	SPO11	P23179	398 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	FEN2	P25621	512 aa	Known RBP	5.67	□□□□□ -1.5
RTG3	YBL103C	FUB1	P25659	250 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	SEC6	P32844	805 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	MNN1	P39106	762 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	MGS1	P40151	587 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	ARO10	Q06408	635 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	VHS3	Q08438	674 aa		5.67	□□□□□ -1.5
RTG3	YBL103C	CHS5	Q12114	671 aa	Known RBP	5.67	□□□□□ -1.5
RTG3	YBL103C	PRP28	P23394	588 aa		5.66	□□□□□ -1.5
RTG3	YBL103C	YHR097C	P38809	366 aa	Known RBP	5.66	□□□□□ -1.5
RTG3	YBL103C	RFX1	P48743	811 aa		5.66	□□□□□ -1.5
RTG3	YBL103C	YGR151C	P53287	111 aa		5.66	□□□□□ -1.5
RTG3	YBL103C	APM1	Q00776	475 aa	Predicted RBP	5.66	□□□□□ -1.5
RTG3	YBL103C	IMG2	P25642	146 aa	Predicted RBP	5.65	□□□□□ -1.5
RTG3	YBL103C	GMH1	P36125	273 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	YKR075C	P36155	307 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	MAL31	P38156	614 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	BEM4	P39011	633 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	YEL020C	P39994	560 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	YIL077C	P40508	320 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	DNM1	P54861	757 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	POM34	Q12445	299 aa		5.65	□□□□□ -1.5
RTG3	YBL103C	ERG20	P08524	352 aa	Known RBP	5.64	□□□□□ -1.51
RTG3	YBL103C	FRS1	P15624	595 aa	Known RBP	5.64	□□□□□ -1.51
RTG3	YBL103C	KSP1	P38691	1029 aa	Known RBP	5.64	□□□□□ -1.51
RTG3	YBL103C	MPS3	P47069	682 aa		5.64	□□□□□ -1.51
RTG3	YBL103C	YDL086W	Q07505	273 aa		5.64	□□□□□ -1.51
RTG3	YBL103C	ADR1	P07248	1323 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms