RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	ASAP1	Q9ULH1	1129 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	PALLD	Q8WX93	1383 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	GPT	P24298	496 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	FBXW7	Q969H0	707 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	KCP	Q6ZWJ8	1503 aa		19.83	■□□□□ 0.77
PHGDH-223	ENST00000641597	RNF113A	O15541	343 aa	Known RBP	19.83	■□□□□ 0.77
PHGDH-223	ENST00000641597	SMARCC2	Q8TAQ2	1214 aa		19.83	■□□□□ 0.77
PHGDH-223	ENST00000641597	GOLPH3L	Q9H4A5	285 aa		19.83	■□□□□ 0.77
PHGDH-223	ENST00000641597	LAMB4	A4D0S4	1761 aa		19.83	■□□□□ 0.76
PHGDH-223	ENST00000641597	LRMP	Q12912	555 aa		19.83	■□□□□ 0.76
PHGDH-223	ENST00000641597	WASHC4	Q2M389	1173 aa		19.83	■□□□□ 0.76
PHGDH-223	ENST00000641597	CCDC191	Q8NCU4	936 aa		19.83	■□□□□ 0.76
PHGDH-223	ENST00000641597	USP28	Q96RU2	1077 aa		19.83	■□□□□ 0.76
PHGDH-223	ENST00000641597	CLSTN2	Q9H4D0	955 aa		19.83	■□□□□ 0.76
PHGDH-223	ENST00000641597	NUP188	Q5SRE5	1749 aa		19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	CPD	O75976	1380 aa		19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	SASS6	Q6UVJ0	657 aa		19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	ILDR1	Q86SU0	546 aa	Predicted RBP	19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	DNAJC10	Q8IXB1	793 aa		19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	XAGE2	Q96GT9	111 aa		19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	HELLS	Q9NRZ9	838 aa		19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	PDIA3	P30101	505 aa	Known RBP	19.82	■□□□□ 0.76
PHGDH-223	ENST00000641597	GORAB	Q5T7V8	394 aa		19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	PUS7L	Q9H0K6	701 aa	Known RBP	19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	CEP126	Q9P2H0	1117 aa		19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	IL2RB	P14784	551 aa		19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	ZAP70	P43403	619 aa		19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	CCDC57	Q2TAC2	916 aa		19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	DSCC1	Q9BVC3	393 aa		19.81	■□□□□ 0.76
PHGDH-223	ENST00000641597	FDPS	P14324	419 aa	Known RBP	19.8	■□□□□ 0.76
PHGDH-223	ENST00000641597	RFX7	Q2KHR2	1363 aa		19.8	■□□□□ 0.76
PHGDH-223	ENST00000641597	ERVV-2	B6SEH9	535 aa		19.8	■□□□□ 0.76
PHGDH-223	ENST00000641597	HLF	Q16534	295 aa		19.8	■□□□□ 0.76
PHGDH-223	ENST00000641597	COL5A2	P05997	1499 aa	Predicted RBP	19.79	■□□□□ 0.76
PHGDH-223	ENST00000641597	TERF1	P54274	439 aa		19.79	■□□□□ 0.76
PHGDH-223	ENST00000641597	C11orf57	Q6ZUT1	292 aa	Predicted RBP	19.79	■□□□□ 0.76
PHGDH-223	ENST00000641597	ZNF165	P49910	485 aa		19.79	■□□□□ 0.76
PHGDH-223	ENST00000641597	TTC39A	Q5SRH9	613 aa		19.79	■□□□□ 0.76
PHGDH-223	ENST00000641597	KIAA1524	Q8TCG1	905 aa		19.79	■□□□□ 0.76
PHGDH-223	ENST00000641597	TCIRG1	Q13488	830 aa		19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	CCDC186	Q7Z3E2	898 aa		19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	CCAR1	Q8IX12	1150 aa	Known RBP	19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	ISCA1	Q9BUE6	129 aa		19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	DDX19A	Q9NUU7	478 aa	Known RBP	19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	FGA	P02671	866 aa		19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	RBM43	Q6ZSC3	357 aa	Known RBP	19.78	■□□□□ 0.76
PHGDH-223	ENST00000641597	TRIM5	Q9C035	493 aa		19.77	■□□□□ 0.76
PHGDH-223	ENST00000641597	GPR108	Q9NPR9	543 aa		19.77	■□□□□ 0.76
PHGDH-223	ENST00000641597	UBR2	Q8IWV8	1755 aa		19.77	■□□□□ 0.76
PHGDH-223	ENST00000641597	DRC7	Q8IY82	874 aa		19.77	■□□□□ 0.75
PHGDH-223	ENST00000641597	PIGB	Q92521	554 aa		19.77	■□□□□ 0.75
PHGDH-223	ENST00000641597	AGXT2	Q9BYV1	514 aa		19.77	■□□□□ 0.75
PHGDH-223	ENST00000641597	SALL1	Q9NSC2	1324 aa		19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	POLR3D	P05423	398 aa	Predicted RBP	19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	EVA1C	P58658	441 aa		19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	TAF7L	Q5H9L4	462 aa		19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	TMOD3	Q9NYL9	352 aa		19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	NWD2	Q9ULI1	1742 aa		19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	HMGB1	P09429	215 aa	Known RBP	19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	GREM2	Q9H772	168 aa		19.76	■□□□□ 0.75
PHGDH-223	ENST00000641597	CARMIL3	Q8ND23	1372 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	SNAP23	O00161	211 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	RXRA	P19793	462 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	SNW1	Q13573	536 aa	Known RBP	19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	ARID5B	Q14865	1188 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	SPTLC3	Q9NUV7	552 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	CFAP45	Q9UL16	551 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	DCC	P43146	1447 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	ABCC6	O95255	1503 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	CIAO1	O76071	339 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	ME1	P48163	572 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	ANTXR2	P58335	489 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	NKX1-1	Q15270	411 aa	Predicted RBP	19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	CCDC144B	Q3MJ40	725 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	CCDC158	Q5M9N0	1113 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	CCDC144CP	Q8IYA2	1237 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	PDCL3	Q9H2J4	239 aa		19.75	■□□□□ 0.75
PHGDH-223	ENST00000641597	LLPH	Q9BRT6	129 aa	Known RBP	19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	BCL11B	Q9C0K0	894 aa	Predicted RBP	19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	INCENP	Q9NQS7	918 aa		19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	PARP4	Q9UKK3	1724 aa	Known RBP	19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	MCAM	P43121	646 aa		19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	NAA16	Q6N069	864 aa	Predicted RBP	19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	AIFM3	Q96NN9	605 aa		19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	RCOR1	Q9UKL0	485 aa		19.74	■□□□□ 0.75
PHGDH-223	ENST00000641597	PDIA4	P13667	645 aa	Known RBP	19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	ZNF75D	P51815	510 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	HELB	Q8NG08	1087 aa	Predicted RBP	19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	HPS5	Q9UPZ3	1129 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	KLF18	A0A0U1RQI7	1052 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597		A0A1B0GVL5	298 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	PRC1	O43663	620 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	IFIT5	Q13325	482 aa	Known RBP	19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	VSIG10	Q8N0Z9	540 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	MYRIP	Q8NFW9	859 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	SLC4A9	Q96Q91	983 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	CARD10	Q9BWT7	1032 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	SENP2	Q9HC62	589 aa		19.73	■□□□□ 0.75
PHGDH-223	ENST00000641597	CLIC4	Q9Y696	253 aa		19.73	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms