RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ZBTB3Q9H5J0 574 aa19.42■□□□□ 0.7
HNRNPU-228ENST00000640306 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
HNRNPU-228ENST00000640306 PFKFB2O60825 505 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 CABP4P57796 275 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.73e-7■■■■□ 19.6
HNRNPU-228ENST00000640306 CCDC73Q6ZRK6 1079 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 SMARCC2Q8TAQ2 1214 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 C5P01031 1676 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 KIF1AQ12756 1690 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 USP27XA6NNY8 438 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 E7EWF7 191 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 FSIP1Q8NA03 581 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 GJB4Q9NTQ9 266 aa19.41■□□□□ 0.7
HNRNPU-228ENST00000640306 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 HSPD1P10809 573 aaKnown RBP19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 IQCB1Q15051 598 aa19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 MEGF6O75095 1541 aa19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 KINO60870 393 aaKnown RBP19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 ATG9AQ7Z3C6 839 aa19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 PUS3Q9BZE2 481 aaKnown RBP19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 TRMT1Q9NXH9 659 aaKnown RBP19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 RGPD5Q99666 1765 aa19.4■□□□□ 0.7
HNRNPU-228ENST00000640306 POLR3DP05423 398 aaPredicted RBP19.39■□□□□ 0.7
HNRNPU-228ENST00000640306 A0A1B0GVL5 298 aa19.39■□□□□ 0.69
HNRNPU-228ENST00000640306 SLIT3O75094 1523 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 IFIT1P09914 478 aaKnown RBP19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 CASP7P55210 303 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 FOXO4P98177 505 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 SNW1Q13573 536 aaKnown RBP19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 PRDM4Q9UKN5 801 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 IGSF3O75054 1194 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 A1BGP04217 495 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 MAST3O60307 1309 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 NBPF26B4DH59 902 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 PDIA3P30101 505 aaKnown RBP19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 NBPF14Q5TI25 921 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 NBPF10Q6P3W6 841 aaKnown RBP19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 NBPF15Q8N660 670 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 AOPEPQ8N6M6 819 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 RCOR1Q9UKL0 485 aa19.38■□□□□ 0.69
HNRNPU-228ENST00000640306 M0R2C6 588 aa19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 STX1AQ16623 288 aa19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 V9GYY5 206 aaPredicted RBP19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 SMAP1Q8IYB5 467 aaPredicted RBP19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 PLBD2Q8NHP8 589 aa19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 SDF4Q9BRK5 362 aa19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
HNRNPU-228ENST00000640306 A0A1B0GUL7 405 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 BIN1O00499 593 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 EXOSC10Q01780 885 aaKnown RBP19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 NCBP1Q09161 790 aaKnown RBP19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 LRRC8AQ8IWT6 810 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 MRC1P22897 1456 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 NAA16Q6N069 864 aaPredicted RBP19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
HNRNPU-228ENST00000640306 HMGB1P09429 215 aaKnown RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 ZMYM1Q5SVZ6 1142 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 KLHL34Q8N239 644 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 OSBP2Q969R2 916 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 SYTL4Q96C24 671 aaPredicted RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 LLPHQ9BRT6 129 aaKnown RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 SKILP12757 684 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 ISM2Q6H9L7 571 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 PCDHA7Q9UN72 937 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 ALS2Q96Q42 1657 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 FDPSP14324 419 aaKnown RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 DHX40Q8IX18 779 aaKnown RBP19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 CCDC112Q8NEF3 446 aa19.35■□□□□ 0.69
HNRNPU-228ENST00000640306 CTIFO43310 598 aaKnown RBP19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 FAM160A1Q05DH4 1040 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 GORABQ5T7V8 394 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 HELLSQ9NRZ9 838 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 CLIC4Q9Y696 253 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 ADORA1P30542 326 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 ANKRD7Q92527 254 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 DSCC1Q9BVC3 393 aa19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 CWC25Q9NXE8 425 aaPredicted RBP19.34■□□□□ 0.69
HNRNPU-228ENST00000640306 CARMIL3Q8ND23 1372 aa19.33■□□□□ 0.69
HNRNPU-228ENST00000640306 CCDC69A6NI79 296 aa19.33■□□□□ 0.69
HNRNPU-228ENST00000640306 ZSCAN20P17040 1043 aaPredicted RBP19.33■□□□□ 0.69
HNRNPU-228ENST00000640306 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.69
HNRNPU-228ENST00000640306 RNF113AO15541 343 aaKnown RBP19.33■□□□□ 0.68
HNRNPU-228ENST00000640306 NDUFA8P51970 172 aa19.33■□□□□ 0.68
HNRNPU-228ENST00000640306 CEP135Q66GS9 1140 aa19.33■□□□□ 0.68
HNRNPU-228ENST00000640306 SMTNL1A8MU46 457 aa19.32■□□□□ 0.68
HNRNPU-228ENST00000640306 H7C1W4 665 aa19.32■□□□□ 0.68
HNRNPU-228ENST00000640306 STK38Q15208 465 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms