RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 LILRB5O75023 590 aa11.34□□□□□ -0.59
LINC01108-202ENST00000635227 SPACA7Q96KW9 195 aa11.34□□□□□ -0.59
LINC01108-202ENST00000635227 KIF13AQ9H1H9 1805 aa11.34□□□□□ -0.59
LINC01108-202ENST00000635227 NEFLP07196 543 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 AFF1P51825 1210 aaKnown RBP11.33□□□□□ -0.6
LINC01108-202ENST00000635227 GRIK5Q16478 980 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 RASSF4Q9H2L5 321 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 PRDM6Q9NQX0 595 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 LATS2Q9NRM7 1088 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 MKL2Q9ULH7 1088 aa11.33□□□□□ -0.6
LINC01108-202ENST00000635227 EIF1AYO14602 144 aaKnown RBP11.32□□□□□ -0.6
LINC01108-202ENST00000635227 CPNE3O75131 537 aaKnown RBP11.32□□□□□ -0.6
LINC01108-202ENST00000635227 TRPA1O75762 1119 aa11.32□□□□□ -0.6
LINC01108-202ENST00000635227 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
LINC01108-202ENST00000635227 DNAJC14Q6Y2X3 702 aaPredicted RBP11.32□□□□□ -0.6
LINC01108-202ENST00000635227 PODNQ7Z5L7 613 aa11.32□□□□□ -0.6
LINC01108-202ENST00000635227 BEND7Q8N7W2 519 aaPredicted RBP11.32□□□□□ -0.6
LINC01108-202ENST00000635227 CSRNP1Q96S65 589 aa11.32□□□□□ -0.6
LINC01108-202ENST00000635227 NID1P14543 1247 aa11.31□□□□□ -0.6
LINC01108-202ENST00000635227 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
LINC01108-202ENST00000635227 TTC9Q92623 222 aa11.31□□□□□ -0.6
LINC01108-202ENST00000635227 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
LINC01108-202ENST00000635227 SCARF2Q96GP6 870 aaPredicted RBP11.31□□□□□ -0.6
LINC01108-202ENST00000635227 CEP164Q9UPV0 1460 aa11.31□□□□□ -0.6
LINC01108-202ENST00000635227 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 ANKRD33BA6NCL7 494 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 ADAMTSL4Q6UY14 1074 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 PBX4Q9BYU1 374 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 DZANK1Q9NVP4 752 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
LINC01108-202ENST00000635227 SPATA31D1Q6ZQQ2 1576 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 NFKBIEO00221 500 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 GNB5O14775 395 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 EDN3P14138 238 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01108-202ENST00000635227 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
LINC01108-202ENST00000635227 GALNT12Q8IXK2 581 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 HHIPQ96QV1 700 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 ZKSCAN3Q9BRR0 538 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 SUV39H2Q9H5I1 410 aa11.29□□□□□ -0.6
LINC01108-202ENST00000635227 OSMRQ99650 979 aa11.28□□□□□ -0.6
LINC01108-202ENST00000635227 NPHS2Q9NP85 383 aa11.28□□□□□ -0.6
LINC01108-202ENST00000635227 ZNF608Q9ULD9 1512 aaPredicted RBP11.28□□□□□ -0.6
LINC01108-202ENST00000635227 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
LINC01108-202ENST00000635227 P4HBP07237 508 aaKnown RBP11.27□□□□□ -0.61
LINC01108-202ENST00000635227 MAPK8P45983 427 aa11.27□□□□□ -0.61
LINC01108-202ENST00000635227 TMCO4Q5TGY1 634 aa11.27□□□□□ -0.61
LINC01108-202ENST00000635227 CCDC74AQ96AQ1 378 aa11.27□□□□□ -0.61
LINC01108-202ENST00000635227 POP1Q99575 1024 aaKnown RBP11.27□□□□□ -0.61
LINC01108-202ENST00000635227 PLVAPQ9BX97 442 aa11.27□□□□□ -0.61
LINC01108-202ENST00000635227 SMNDC1O75940 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01108-202ENST00000635227 IRS1P35568 1242 aa11.26□□□□□ -0.61
LINC01108-202ENST00000635227 ENOX2Q16206 610 aaKnown RBP11.26□□□□□ -0.61
LINC01108-202ENST00000635227 SETDB2Q96T68 719 aa11.26□□□□□ -0.61
LINC01108-202ENST00000635227 LACRTQ9GZZ8 138 aa11.26□□□□□ -0.61
LINC01108-202ENST00000635227 BAG6P46379 1132 aa11.25□□□□□ -0.61
LINC01108-202ENST00000635227 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
LINC01108-202ENST00000635227 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
LINC01108-202ENST00000635227 A0A1W2PP55 124 aa11.24□□□□□ -0.61
LINC01108-202ENST00000635227 PDE2AO00408 941 aaPredicted RBP11.24□□□□□ -0.61
LINC01108-202ENST00000635227 NPAS4Q8IUM7 802 aa11.24□□□□□ -0.61
LINC01108-202ENST00000635227 DMRTC2Q8IXT2 367 aaPredicted RBP11.24□□□□□ -0.61
LINC01108-202ENST00000635227 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
LINC01108-202ENST00000635227 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
LINC01108-202ENST00000635227 PIK3R2O00459 728 aa11.23□□□□□ -0.61
LINC01108-202ENST00000635227 COL8A1P27658 744 aa11.23□□□□□ -0.61
LINC01108-202ENST00000635227 PI16Q6UXB8 463 aa11.23□□□□□ -0.61
LINC01108-202ENST00000635227 IL22RA1Q8N6P7 574 aa11.23□□□□□ -0.61
LINC01108-202ENST00000635227 TMEM102Q8N9M5 508 aaPredicted RBP11.23□□□□□ -0.61
LINC01108-202ENST00000635227 NXPE3Q969Y0 559 aa11.23□□□□□ -0.61
LINC01108-202ENST00000635227 TRAPPC3LQ5T215 181 aa11.22□□□□□ -0.61
LINC01108-202ENST00000635227 WFDC8Q8IUA0 241 aa11.22□□□□□ -0.61
LINC01108-202ENST00000635227 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
LINC01108-202ENST00000635227 GSK3AP49840 483 aa11.21□□□□□ -0.61
LINC01108-202ENST00000635227 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
LINC01108-202ENST00000635227 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
LINC01108-202ENST00000635227 METTL12A8MUP2 240 aa11.2□□□□□ -0.62
LINC01108-202ENST00000635227 RNF225M0QZC1 329 aaPredicted RBP11.2□□□□□ -0.62
LINC01108-202ENST00000635227 KIAA0319Q5VV43 1072 aa11.2□□□□□ -0.62
LINC01108-202ENST00000635227 TCF12Q99081 682 aa11.2□□□□□ -0.62
LINC01108-202ENST00000635227 NOP53Q9NZM5 478 aaKnown RBP11.2□□□□□ -0.62
LINC01108-202ENST00000635227 PTPRAP18433 802 aa11.19□□□□□ -0.62
LINC01108-202ENST00000635227 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
LINC01108-202ENST00000635227 BHLHE41Q9C0J9 482 aaPredicted RBP11.19□□□□□ -0.62
LINC01108-202ENST00000635227 ADAM19Q9H013 955 aa11.19□□□□□ -0.62
LINC01108-202ENST00000635227 EHD4Q9H223 541 aa11.19□□□□□ -0.62
LINC01108-202ENST00000635227 LIN7BQ9HAP6 207 aa11.19□□□□□ -0.62
LINC01108-202ENST00000635227 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
LINC01108-202ENST00000635227 KDM6BO15054 1643 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 A0A0A0MRY4 1105 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 GADD45BO75293 160 aaPredicted RBP11.18□□□□□ -0.62
LINC01108-202ENST00000635227 LDHBP07195 334 aaKnown RBP11.18□□□□□ -0.62
LINC01108-202ENST00000635227 EPHA1P21709 976 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 CDC27P30260 824 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 CDC25BP30305 580 aa11.18□□□□□ -0.62
LINC01108-202ENST00000635227 KCNMA1Q12791 1236 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms