RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MAP4K1Q92918 833 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 FAM89AQ96GI7 184 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 IL25Q9H293 177 aa8.56□□□□□ -1.04
BRCA1-230ENST00000634433 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 A0A0G2JS52 829 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 EIF5P55010 431 aaKnown RBP8.55□□□□□ -1.04
BRCA1-230ENST00000634433 SIK1P57059 783 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
BRCA1-230ENST00000634433 HLFQ16534 295 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 CCDC158Q5M9N0 1113 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
BRCA1-230ENST00000634433 IVNS1ABPQ9Y6Y0 642 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 TJP1Q07157 1748 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 ANKRD18BA2A2Z9 1011 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 IRS4O14654 1257 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-230ENST00000634433 TRIM66O15016 1216 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 PDE8AO60658 829 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 R3HDM1Q15032 1099 aaKnown RBP8.55□□□□□ -1.04
BRCA1-230ENST00000634433 NECTIN1Q15223 517 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 PARP10Q53GL7 1025 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
BRCA1-230ENST00000634433 ACSBG1Q96GR2 724 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 SPON1Q9HCB6 807 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 CYP46A1Q9Y6A2 500 aa8.55□□□□□ -1.04
BRCA1-230ENST00000634433 CTSWP56202 376 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 PTH1RQ03431 593 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 EN1Q05925 392 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 GRIPAP1Q4V328 841 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 LRRC24Q50LG9 513 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 PRPF40BQ6NWY9 871 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 ZNF34Q8IZ26 560 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 KBTBD3Q8NAB2 608 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 ZSCAN31Q96LW9 406 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 FAM227BQ96M60 508 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 DNAJC2Q99543 621 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 LIMCH1Q9UPQ0 1083 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 RBM8AQ9Y5S9 174 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 A0A1B0GUL7 405 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 IFIT1P09914 478 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 GPTP24298 496 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 CRKLP46109 303 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 TIMM10P62072 90 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 KRT32Q14532 448 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 MCMDC2Q4G0Z9 681 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 VPS53Q5VIR6 699 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 ZNF594Q96JF6 807 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 UPF3BQ9BZI7 483 aaKnown RBP8.54□□□□□ -1.04
BRCA1-230ENST00000634433 HELLSQ9NRZ9 838 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 PAG1Q9NWQ8 432 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 KLHL42Q9P2K6 505 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 DOT1LQ8TEK3 1739 aa8.54□□□□□ -1.04
BRCA1-230ENST00000634433 ZNF609O15014 1411 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 KCNQ2O43526 872 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 CASTP20810 708 aaKnown RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ANKRD1Q15327 319 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 CREB3L3Q68CJ9 461 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 TTLL11Q8NHH1 800 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ZSWIM6Q9HCJ5 1215 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 TBC1D2BQ9UPU7 963 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 U3KPZ7 1027 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 PALLDQ8WX93 1383 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 MED23Q9ULK4 1368 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 A0A0D9SFI3 127 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 ITGA6P23229 1130 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 SSFA2P28290 1259 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 TTC39AQ5SRH9 613 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 RBM26Q5T8P6 1007 aaKnown RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 LDHAL6AQ6ZMR3 332 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 JAKMIP1Q96N16 626 aaKnown RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 TTC14Q96N46 770 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-230ENST00000634433 SBF2Q86WG5 1849 aa8.53□□□□□ -1.04
BRCA1-230ENST00000634433 STK25O00506 426 aa8.52□□□□□ -1.04
BRCA1-230ENST00000634433 SLC27A2O14975 620 aa8.52□□□□□ -1.04
BRCA1-230ENST00000634433 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.04
BRCA1-230ENST00000634433 SETQ01105 290 aaPredicted RBP8.52□□□□□ -1.04
BRCA1-230ENST00000634433 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.04
BRCA1-230ENST00000634433 METTL24Q5JXM2 366 aa8.52□□□□□ -1.04
BRCA1-230ENST00000634433 SPTY2D1Q68D10 685 aaPredicted RBP8.52□□□□□ -1.04
BRCA1-230ENST00000634433 RUFY3Q7L099 469 aa8.52□□□□□ -1.04
BRCA1-230ENST00000634433 PUS3Q9BZE2 481 aaKnown RBP8.52□□□□□ -1.04
BRCA1-230ENST00000634433 ALDH8A1Q9H2A2 487 aaPredicted RBP8.52□□□□□ -1.04
BRCA1-230ENST00000634433 CNNM1Q9NRU3 951 aa8.52□□□□□ -1.04
BRCA1-230ENST00000634433 PLSCR2Q9NRY7 297 aa8.52□□□□□ -1.04
BRCA1-230ENST00000634433 SH3TC1Q8TE82 1336 aa8.52□□□□□ -1.05
BRCA1-230ENST00000634433 TAF5LO75529 589 aa8.52□□□□□ -1.05
BRCA1-230ENST00000634433 BAG4O95429 457 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms