RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 AGXT2Q9BYV1 514 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 ABCC6O95255 1503 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 GLI3P10071 1580 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 LRMPQ12912 555 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
VARS2-213ENST00000625423 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 M0R2C6 588 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 USP28Q96RU2 1077 aa13.23□□□□□ -0.29
VARS2-213ENST00000625423 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
VARS2-213ENST00000625423 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
VARS2-213ENST00000625423 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
VARS2-213ENST00000625423 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
VARS2-213ENST00000625423 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
VARS2-213ENST00000625423 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
VARS2-213ENST00000625423 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
VARS2-213ENST00000625423 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
VARS2-213ENST00000625423 ZCRB1Q8TBF4 217 aaKnown RBP13.21□□□□□ -0.29
VARS2-213ENST00000625423 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
VARS2-213ENST00000625423 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
VARS2-213ENST00000625423 GPHNQ9NQX3 736 aaPredicted RBP13.21□□□□□ -0.29
VARS2-213ENST00000625423 SALL1Q9NSC2 1324 aa13.21□□□□□ -0.29
VARS2-213ENST00000625423 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.3
VARS2-213ENST00000625423 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.3
VARS2-213ENST00000625423 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.3
VARS2-213ENST00000625423 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.3
VARS2-213ENST00000625423 CHAF1AQ13111 956 aaPredicted RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 SNW1Q13573 536 aaKnown RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 ZMYND15Q9H091 742 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 A0A087WWV3 80 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 CIAO1O76071 339 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 HAND2P61296 217 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 IQCB1Q15051 598 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 ADORA1P30542 326 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
VARS2-213ENST00000625423 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
VARS2-213ENST00000625423 GOLGA6L19H0YKK7 550 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CAVIN2O95810 425 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
VARS2-213ENST00000625423 ME1P48163 572 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 TTC39AQ5SRH9 613 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 LAMA4Q16363 1823 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CTAGE5O15320 804 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 STX1AQ16623 288 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 CPDO75976 1380 aa13.19□□□□□ -0.3
VARS2-213ENST00000625423 KINO60870 393 aaKnown RBP13.18□□□□□ -0.3
VARS2-213ENST00000625423 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 FSIP1Q8NA03 581 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 FOXP2O15409 715 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 CACTINQ8WUQ7 758 aaKnown RBP13.18□□□□□ -0.3
VARS2-213ENST00000625423 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
VARS2-213ENST00000625423 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 A0A0G2JS52 829 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 SCARF1Q14162 830 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
VARS2-213ENST00000625423 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
VARS2-213ENST00000625423 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
VARS2-213ENST00000625423 KDM4FA0A1W2PPD8 638 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 C16orf45Q96MC5 204 aaPredicted RBP13.17□□□□□ -0.3
VARS2-213ENST00000625423 TJP1Q07157 1748 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 IMMTQ16891 758 aaKnown RBP13.17□□□□□ -0.3
VARS2-213ENST00000625423 ISCA1Q9BUE6 129 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 BECN2A8MW95 431 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 FGAP02671 866 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 CDC25BP30305 580 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 CTNNA3Q9UI47 895 aa13.17□□□□□ -0.3
VARS2-213ENST00000625423 ZAP70P43403 619 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 SARM1Q6SZW1 724 aa13.16□□□□□ -0.3
VARS2-213ENST00000625423 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1888.4 ms