RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 KAT6BQ8WYB5 2073 aa20.69■□□□□ 0.9
TRA2A-212ENST00000621813 STX6O43752 255 aa20.69■□□□□ 0.9
TRA2A-212ENST00000621813 PTMAP06454 111 aaKnown RBP20.69■□□□□ 0.9
TRA2A-212ENST00000621813 RPS6KB1P23443 525 aa20.69■□□□□ 0.9
TRA2A-212ENST00000621813 TIMM10P62072 90 aa20.69■□□□□ 0.9
TRA2A-212ENST00000621813 LRRFIP1Q32MZ4 808 aaKnown RBP20.69■□□□□ 0.9
TRA2A-212ENST00000621813 FOXD4L5Q5VV16 416 aaPredicted RBP20.69■□□□□ 0.9
TRA2A-212ENST00000621813 CTR9Q6PD62 1173 aa20.69■□□□□ 0.9
TRA2A-212ENST00000621813 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
TRA2A-212ENST00000621813 FOXD4L4Q8WXT5 416 aaPredicted RBP20.69■□□□□ 0.9
TRA2A-212ENST00000621813 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
TRA2A-212ENST00000621813 SPTLC3Q9NUV7 552 aa20.69■□□□□ 0.9
TRA2A-212ENST00000621813 APPP05067 770 aa20.68■□□□□ 0.9
TRA2A-212ENST00000621813 ZSCAN22P10073 491 aaPredicted RBP20.68■□□□□ 0.9
TRA2A-212ENST00000621813 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
TRA2A-212ENST00000621813 GPT2Q8TD30 523 aa20.68■□□□□ 0.9
TRA2A-212ENST00000621813 TRIM34Q9BYJ4 488 aa20.68■□□□□ 0.9
TRA2A-212ENST00000621813 ABCC12Q96J65 1359 aa20.68■□□□□ 0.9
TRA2A-212ENST00000621813 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
TRA2A-212ENST00000621813 IFIT1P09914 478 aaKnown RBP20.68■□□□□ 0.9
TRA2A-212ENST00000621813 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
TRA2A-212ENST00000621813 U2AF2P26368 475 aaKnown RBP eCLIP20.68■□□□□ 0.93e-7■■□□□ 13.3
TRA2A-212ENST00000621813 CTIFO43310 598 aaKnown RBP20.67■□□□□ 0.9
TRA2A-212ENST00000621813 LARGE1O95461 756 aa20.67■□□□□ 0.9
TRA2A-212ENST00000621813 SYT1P21579 422 aa20.67■□□□□ 0.9
TRA2A-212ENST00000621813 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
TRA2A-212ENST00000621813 PIP4K2BP78356 416 aa20.67■□□□□ 0.9
TRA2A-212ENST00000621813 NOLC1Q14978 699 aaKnown RBP eCLIP20.67■□□□□ 0.9
TRA2A-212ENST00000621813 NLRP10Q86W26 655 aa20.67■□□□□ 0.9
TRA2A-212ENST00000621813 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
TRA2A-212ENST00000621813 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
TRA2A-212ENST00000621813 GOLIM4O00461 696 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 ME3Q16798 604 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 CCDC158Q5M9N0 1113 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 TMEM87AQ8NBN3 555 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 NDUFB9Q9Y6M9 179 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 CICQ96RK0 1608 aaPredicted RBP20.66■□□□□ 0.9
TRA2A-212ENST00000621813 TCHHQ07283 1943 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 CAPN2P17655 700 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 GJB2P29033 226 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 TERF2Q15554 542 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 SLC4A9Q96Q91 983 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 LARP6Q9BRS8 491 aaKnown RBP20.66■□□□□ 0.9
TRA2A-212ENST00000621813 DSCC1Q9BVC3 393 aa20.66■□□□□ 0.9
TRA2A-212ENST00000621813 PUS3Q9BZE2 481 aaKnown RBP20.66■□□□□ 0.9
TRA2A-212ENST00000621813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.66■□□□□ 0.97e-9■■■■■ 29.7
TRA2A-212ENST00000621813 LRSAM1Q6UWE0 723 aa20.65■□□□□ 0.9
TRA2A-212ENST00000621813 SYAP1Q96A49 352 aaPredicted RBP20.65■□□□□ 0.9
TRA2A-212ENST00000621813 SYTL4Q96C24 671 aaPredicted RBP20.65■□□□□ 0.9
TRA2A-212ENST00000621813 TPCN1Q9ULQ1 816 aa20.65■□□□□ 0.9
TRA2A-212ENST00000621813 MORC2Q9Y6X9 1032 aaPredicted RBP20.65■□□□□ 0.9
TRA2A-212ENST00000621813 SPATA31A1Q5TZJ5 1347 aa20.65■□□□□ 0.9
TRA2A-212ENST00000621813 HMGB1P09429 215 aaKnown RBP20.65■□□□□ 0.9
TRA2A-212ENST00000621813 ZMYM1Q5SVZ6 1142 aa20.65■□□□□ 0.9
TRA2A-212ENST00000621813 NEK1Q96PY6 1258 aa20.65■□□□□ 0.9
TRA2A-212ENST00000621813 ZBTB1Q9Y2K1 713 aa20.65■□□□□ 0.9
TRA2A-212ENST00000621813 F13A1P00488 732 aa20.64■□□□□ 0.89
TRA2A-212ENST00000621813 HLFQ16534 295 aa20.64■□□□□ 0.89
TRA2A-212ENST00000621813 PDCP20941 246 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 PRIM1P49642 420 aaKnown RBP20.63■□□□□ 0.89
TRA2A-212ENST00000621813 DDB1Q16531 1140 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 GORABQ5T7V8 394 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 DDX41Q9UJV9 622 aaKnown RBP20.63■□□□□ 0.89
TRA2A-212ENST00000621813 LAMA4Q16363 1823 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 MYH7P12883 1935 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 RREB1Q92766 1687 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 RNF113AO15541 343 aaKnown RBP20.63■□□□□ 0.89
TRA2A-212ENST00000621813 ZFYP08048 801 aaPredicted RBP20.63■□□□□ 0.89
TRA2A-212ENST00000621813 CTSWP56202 376 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 TTC39AQ5SRH9 613 aa20.63■□□□□ 0.89
TRA2A-212ENST00000621813 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
TRA2A-212ENST00000621813 IGSF3O75054 1194 aa20.62■□□□□ 0.89
TRA2A-212ENST00000621813 CCDC129Q6ZRS4 1044 aa20.62■□□□□ 0.89
TRA2A-212ENST00000621813 DZIP3Q86Y13 1208 aaKnown RBP20.62■□□□□ 0.89
TRA2A-212ENST00000621813 TTLL11Q8NHH1 800 aa20.62■□□□□ 0.89
TRA2A-212ENST00000621813 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
TRA2A-212ENST00000621813 AK7Q96M32 723 aa20.62■□□□□ 0.89
TRA2A-212ENST00000621813 CCDC9Q9Y3X0 531 aaKnown RBP20.62■□□□□ 0.89
TRA2A-212ENST00000621813 ANKRD18BA2A2Z9 1011 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 CYP21A2P08686 494 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 ST3GAL1Q11201 340 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 TOB2Q14106 344 aaPredicted RBP20.61■□□□□ 0.89
TRA2A-212ENST00000621813 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 GPTP24298 496 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 RIC1Q4ADV7 1423 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 TMEM63CQ9P1W3 806 aa20.61■□□□□ 0.89
TRA2A-212ENST00000621813 TRMT112Q9UI30 125 aaKnown RBP20.61■□□□□ 0.89
TRA2A-212ENST00000621813 IRS4O14654 1257 aaPredicted RBP20.6■□□□□ 0.89
TRA2A-212ENST00000621813 PDE8AO60658 829 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 PHF14O94880 888 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 ITGA6P23229 1130 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 TSC1Q92574 1164 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 MTMR6Q9Y217 621 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 RIPOR2Q9Y4F9 1068 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
TRA2A-212ENST00000621813 LDHAL6AQ6ZMR3 332 aa20.59■□□□□ 0.89
TRA2A-212ENST00000621813 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
TRA2A-212ENST00000621813 FEZ2Q9UHY8 353 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms