RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 GMLQ99445 158 aa22.67■■□□□ 1.22
SCAMP4-213ENST00000621748 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
SCAMP4-213ENST00000621748 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
SCAMP4-213ENST00000621748 COA1Q9GZY4 146 aa22.66■■□□□ 1.22
SCAMP4-213ENST00000621748 ZNF609O15014 1411 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 KCNJ4P48050 445 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 VEGFBP49765 207 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 TAF7LQ5H9L4 462 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 LDHAL6AQ6ZMR3 332 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 CDC37L1Q7L3B6 337 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 USP44Q9H0E7 712 aa22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 ABT1Q9ULW3 272 aaKnown RBP22.65■■□□□ 1.22
SCAMP4-213ENST00000621748 ZNF646O15015 1829 aaPredicted RBP22.64■■□□□ 1.22
SCAMP4-213ENST00000621748 IRS2Q9Y4H2 1338 aa22.64■■□□□ 1.22
SCAMP4-213ENST00000621748 RASSF10A6NK89 507 aa22.64■■□□□ 1.21
SCAMP4-213ENST00000621748 ZNF280AP59817 542 aaPredicted RBP22.64■■□□□ 1.21
SCAMP4-213ENST00000621748 KIF4BQ2VIQ3 1234 aa22.64■■□□□ 1.21
SCAMP4-213ENST00000621748 DEFB115Q30KQ5 88 aa22.64■■□□□ 1.21
SCAMP4-213ENST00000621748 MXD3Q9BW11 206 aa22.64■■□□□ 1.21
SCAMP4-213ENST00000621748 NOB1Q9ULX3 412 aaKnown RBP22.64■■□□□ 1.21
SCAMP4-213ENST00000621748 RABL6Q3YEC7 729 aaPredicted RBP22.63■■□□□ 1.21
SCAMP4-213ENST00000621748 DACT2Q5SW24 774 aa22.63■■□□□ 1.21
SCAMP4-213ENST00000621748 DLK2Q6UY11 383 aa22.63■■□□□ 1.21
SCAMP4-213ENST00000621748 USP48Q86UV5 1035 aa22.63■■□□□ 1.21
SCAMP4-213ENST00000621748 CNNM1Q9NRU3 951 aa22.63■■□□□ 1.21
SCAMP4-213ENST00000621748 CELF2O95319 508 aaKnown RBP22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 USP17L8P0C7I0 530 aa22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 HSPA1AP0DMV8 641 aaKnown RBP22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 HSPA1BP0DMV9 641 aaKnown RBP22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 STRIP1Q5VSL9 837 aa22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 ANKRD44Q8N8A2 993 aa22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 PUS3Q9BZE2 481 aaKnown RBP22.62■■□□□ 1.21
SCAMP4-213ENST00000621748 ASTN2O75129 1339 aaPredicted RBP22.61■■□□□ 1.21
SCAMP4-213ENST00000621748 PLIN1O60240 522 aa22.61■■□□□ 1.21
SCAMP4-213ENST00000621748 RARSP54136 660 aaKnown RBP22.61■■□□□ 1.21
SCAMP4-213ENST00000621748 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
SCAMP4-213ENST00000621748 C15orf52Q6ZUT6 534 aaKnown RBP22.61■■□□□ 1.21
SCAMP4-213ENST00000621748 FBXW7Q969H0 707 aa22.61■■□□□ 1.21
SCAMP4-213ENST00000621748 TTLL5Q6EMB2 1281 aa22.6■■□□□ 1.21
SCAMP4-213ENST00000621748 KRT26Q7Z3Y9 468 aa22.6■■□□□ 1.21
SCAMP4-213ENST00000621748 CD209Q9NNX6 404 aa22.6■■□□□ 1.21
SCAMP4-213ENST00000621748 SCARF1Q14162 830 aa22.59■■□□□ 1.21
SCAMP4-213ENST00000621748 DCPSQ96C86 337 aaKnown RBP22.59■■□□□ 1.21
SCAMP4-213ENST00000621748 ZNF408Q9H9D4 720 aa22.59■■□□□ 1.21
SCAMP4-213ENST00000621748 MYOZ2Q9NPC6 264 aa22.59■■□□□ 1.21
SCAMP4-213ENST00000621748 TLL2Q9Y6L7 1015 aa22.59■■□□□ 1.21
SCAMP4-213ENST00000621748 GTF2IP78347 998 aa22.58■■□□□ 1.21
SCAMP4-213ENST00000621748 GGA3Q9NZ52 723 aa22.58■■□□□ 1.21
SCAMP4-213ENST00000621748 RIPOR2Q9Y4F9 1068 aa22.58■■□□□ 1.21
SCAMP4-213ENST00000621748 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
SCAMP4-213ENST00000621748 ADM5C9JUS6 153 aa22.57■■□□□ 1.2
SCAMP4-213ENST00000621748 SAPCD2Q86UD0 394 aa22.57■■□□□ 1.2
SCAMP4-213ENST00000621748 HNRNPUQ00839 825 aaKnown RBP eCLIP22.56■■□□□ 1.2
SCAMP4-213ENST00000621748 API5Q9BZZ5 524 aaKnown RBP22.56■■□□□ 1.2
SCAMP4-213ENST00000621748 MYO3BQ8WXR4 1341 aa22.56■■□□□ 1.2
SCAMP4-213ENST00000621748 IL1R1P14778 569 aa22.55■■□□□ 1.2
SCAMP4-213ENST00000621748 LRRC24Q50LG9 513 aa22.55■■□□□ 1.2
SCAMP4-213ENST00000621748 ANGEL2Q5VTE6 544 aaKnown RBP22.55■■□□□ 1.2
SCAMP4-213ENST00000621748 CYP4F22Q6NT55 531 aa22.55■■□□□ 1.2
SCAMP4-213ENST00000621748 KLHDC4Q8TBB5 520 aa22.55■■□□□ 1.2
SCAMP4-213ENST00000621748 UBE4AQ14139 1066 aa22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 NBPF9Q3BBW0 867 aa22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 PAXIP1Q6ZW49 1069 aaPredicted RBP22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 ZNF804AQ7Z570 1209 aa22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 SULF1Q8IWU6 871 aa22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 CAPNS2Q96L46 248 aa22.54■■□□□ 1.2
SCAMP4-213ENST00000621748 COL13A1Q5TAT6 717 aaPredicted RBP22.53■■□□□ 1.2
SCAMP4-213ENST00000621748 KIAA0825Q8IV33 1275 aa22.53■■□□□ 1.2
SCAMP4-213ENST00000621748 CERS5Q8N5B7 392 aa22.53■■□□□ 1.2
SCAMP4-213ENST00000621748 MROH5Q6ZUA9 1318 aa22.53■■□□□ 1.2
SCAMP4-213ENST00000621748 GRM1Q13255 1194 aa22.52■■□□□ 1.2
SCAMP4-213ENST00000621748 ARHGAP45Q92619 1136 aa22.52■■□□□ 1.2
SCAMP4-213ENST00000621748 SCAF8Q9UPN6 1271 aaKnown RBP22.52■■□□□ 1.2
SCAMP4-213ENST00000621748 WNT10BO00744 389 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 BCAR3O75815 825 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 UBTFL1P0CB47 393 aaPredicted RBP22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 ECE1P42892 770 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 GYG1P46976 350 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 RFX5P48382 616 aaPredicted RBP22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 FAM84BQ96KN1 310 aaPredicted RBP22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 WBP1LQ9NX94 342 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 JAG2Q9Y219 1238 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 KIF16BQ96L93 1317 aa22.51■■□□□ 1.19
SCAMP4-213ENST00000621748 FOXN1O15353 648 aa22.5■■□□□ 1.19
SCAMP4-213ENST00000621748 METTL24Q5JXM2 366 aa22.5■■□□□ 1.19
SCAMP4-213ENST00000621748 VGLL2Q8N8G2 317 aa22.5■■□□□ 1.19
SCAMP4-213ENST00000621748 CDCA5Q96FF9 252 aa22.5■■□□□ 1.19
SCAMP4-213ENST00000621748 HHIPL1Q96JK4 782 aa22.5■■□□□ 1.19
SCAMP4-213ENST00000621748 PITPNM2Q9BZ72 1349 aa22.5■■□□□ 1.19
SCAMP4-213ENST00000621748 SASH1O94885 1247 aa22.49■■□□□ 1.19
SCAMP4-213ENST00000621748 HIBADHP31937 336 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-213ENST00000621748 MMP14P50281 582 aa22.49■■□□□ 1.19
SCAMP4-213ENST00000621748 TDRD7Q8NHU6 1098 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-213ENST00000621748 GBA2Q9HCG7 927 aaPredicted RBP22.49■■□□□ 1.19
SCAMP4-213ENST00000621748 HDAC9Q9UKV0 1011 aa22.49■■□□□ 1.19
SCAMP4-213ENST00000621748 AOC2O75106 756 aa22.48■■□□□ 1.19
SCAMP4-213ENST00000621748 PDE8BO95263 885 aa22.48■■□□□ 1.19
SCAMP4-213ENST00000621748 HUNKP57058 714 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms