RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ATP6V1DQ9Y5K8 247 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 U3KPZ7 1027 aaPredicted RBP3.84□□□□□ -1.79
U1.39-201ENST00000621562 BCL9O00512 1426 aa3.84□□□□□ -1.79
U1.39-201ENST00000621562 DUOX1Q9NRD9 1551 aa3.84□□□□□ -1.8
U1.39-201ENST00000621562 TNRC6CQ9HCJ0 1690 aaKnown RBP3.84□□□□□ -1.8
U1.39-201ENST00000621562 UQCRHLA0A096LP55 91 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 NR1I2O75469 434 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 CIAO1O76071 339 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 A1BGP04217 495 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 UQCRHP07919 91 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 PDIA4P13667 645 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 FDPSP14324 419 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 TRHP20396 242 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 PDCP20941 246 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 ADORA1P30542 326 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 GTF2F1P35269 517 aaKnown RBP eCLIP3.83□□□□□ -1.8
U1.39-201ENST00000621562 IL15P40933 162 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 ANTXR2P58335 489 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 KIAA2012Q0VF49 1180 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 SCARF1Q14162 830 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 IQCB1Q15051 598 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 MAP3K11Q16584 847 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 CSPP1Q1MSJ5 1256 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 MCMDC2Q4G0Z9 681 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 RNF20Q5VTR2 975 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 LARP1BQ659C4 914 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 NAA16Q6N069 864 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 PLA2G4DQ86XP0 818 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 MB21D2Q8IYB1 491 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 TTC5Q8N0Z6 440 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 ZNF710Q8N1W2 664 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 C17orf53Q8N3J3 647 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 CCDC191Q8NCU4 936 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 ENGASEQ8NFI3 743 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 MYRIPQ8NFW9 859 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 NKX2-3Q8TAU0 364 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 FAM200AQ8TCP9 573 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 ZNF594Q96JF6 807 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 NEK1Q96PY6 1258 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 DNAJC2Q99543 621 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 LLPHQ9BRT6 129 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 CARD10Q9BWT7 1032 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 LRRC2Q9BYS8 371 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 PUS3Q9BZE2 481 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 NBPF3Q9H094 633 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 NUP62CLQ9H1M0 184 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 GOLPH3LQ9H4A5 285 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 TTC12Q9H892 705 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 CBX8Q9HC52 389 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 HELLSQ9NRZ9 838 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 ATG3Q9NT62 314 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 DDX19AQ9NUU7 478 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 PAG1Q9NWQ8 432 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 CWC25Q9NXE8 425 aaPredicted RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 HPS5Q9UPZ3 1129 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 R3HCC1Q9Y3T6 440 aaKnown RBP3.83□□□□□ -1.8
U1.39-201ENST00000621562 CDHR2Q9BYE9 1310 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 NID2Q14112 1375 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 NHSQ6T4R5 1651 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 LRRC37AA6NMS7 1700 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 ATAD5Q96QE3 1844 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 UBR3Q6ZT12 1888 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 MYH4Q9Y623 1939 aa3.83□□□□□ -1.8
U1.39-201ENST00000621562 GREB1LQ9C091 1923 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 KIF13BQ9NQT8 1826 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 COL1A1P02452 1464 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 MROH7-TTC4A0A0A0MT08 1334 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 A0A1B0GUL7 405 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 PTPDC1A2A3K4 754 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 E7EWF7 191 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 GOLIM4O00461 696 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 DYNC1I1O14576 645 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 RNF113AO15541 343 aaKnown RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 PCCAP05165 728 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 CSF1RP07333 972 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 CCDC192P0DO97 292 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 HSPD1P10809 573 aaKnown RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 ATF3P18847 181 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 CDC25BP30305 580 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 KCNJ4P48050 445 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 ZNF75DP51815 510 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 CABP4P57796 275 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 APOBRQ0VD83 1088 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 STK3Q13188 491 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 TRIM28Q13263 835 aaKnown RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 SNW1Q13573 536 aaKnown RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 ANO6Q4KMQ2 910 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 TTLL5Q6EMB2 1281 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 SARM1Q6SZW1 724 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 C11orf57Q6ZUT1 292 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 DHX32Q7L7V1 743 aaKnown RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 CADPS2Q86UW7 1296 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 MPNDQ8N594 471 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 VGLL2Q8N8G2 317 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 ZCRB1Q8TBF4 217 aaKnown RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 OSBP2Q969R2 916 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 SPATA32Q96LK8 384 aa3.82□□□□□ -1.8
U1.39-201ENST00000621562 ZNF830Q96NB3 372 aaPredicted RBP3.82□□□□□ -1.8
U1.39-201ENST00000621562 SLC4A9Q96Q91 983 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms