RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 FAXDC2Q96IV6 333 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 FUT8Q9BYC5 575 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 TADA3O75528 432 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 GNAI2P04899 355 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 ERCC3P19447 782 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
VPS11-207ENST00000620429 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 G2E3Q7L622 706 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 FNBP4Q8N3X1 1017 aaPredicted RBP12.04□□□□□ -0.48
VPS11-207ENST00000620429 MIEF2Q96C03 454 aa12.04□□□□□ -0.48
VPS11-207ENST00000620429 CALR3Q96L12 384 aaKnown RBP12.04□□□□□ -0.48
VPS11-207ENST00000620429 H0YHG0 523 aa12.03□□□□□ -0.48
VPS11-207ENST00000620429 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
VPS11-207ENST00000620429 MNAT1P51948 309 aa12.03□□□□□ -0.48
VPS11-207ENST00000620429 IRX1P78414 480 aaPredicted RBP12.03□□□□□ -0.48
VPS11-207ENST00000620429 SARNPP82979 210 aaKnown RBP12.03□□□□□ -0.48
VPS11-207ENST00000620429 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
VPS11-207ENST00000620429 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
VPS11-207ENST00000620429 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
VPS11-207ENST00000620429 SALL3Q9BXA9 1300 aa12.03□□□□□ -0.48
VPS11-207ENST00000620429 INHBEP58166 350 aa12.03□□□□□ -0.48
VPS11-207ENST00000620429 KDRP35968 1356 aa12.03□□□□□ -0.48
VPS11-207ENST00000620429 SCP2P22307 547 aa12.02□□□□□ -0.48
VPS11-207ENST00000620429 KCNJ6P48051 423 aa12.02□□□□□ -0.48
VPS11-207ENST00000620429 ANO6Q4KMQ2 910 aa12.02□□□□□ -0.48
VPS11-207ENST00000620429 ARFGAP3Q9NP61 516 aa12.02□□□□□ -0.48
VPS11-207ENST00000620429 TSPYL4Q9UJ04 414 aa12.02□□□□□ -0.48
VPS11-207ENST00000620429 TRPC5Q9UL62 973 aaPredicted RBP12.02□□□□□ -0.48
VPS11-207ENST00000620429 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
VPS11-207ENST00000620429 CCDC69A6NI79 296 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 H3BQF6 201 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 CAVIN2O95810 425 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.49
VPS11-207ENST00000620429 RBM43Q6ZSC3 357 aaKnown RBP12.02□□□□□ -0.49
VPS11-207ENST00000620429 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.49
VPS11-207ENST00000620429 BORCS6Q96GS4 357 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 GNL3LQ9NVN8 582 aaKnown RBP12.02□□□□□ -0.49
VPS11-207ENST00000620429 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 PHLPP2Q6ZVD8 1323 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 MAP2K7O14733 419 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 FIBPO43427 364 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 UNC5CLQ8IV45 518 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 NUP62CLQ9H1M0 184 aa12.02□□□□□ -0.49
VPS11-207ENST00000620429 F13A1P00488 732 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 MICALL1Q8N3F8 863 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 LRRC31Q6UY01 552 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 OTUD6BQ8N6M0 293 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 NECTIN2Q92692 538 aa12.01□□□□□ -0.49
VPS11-207ENST00000620429 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
VPS11-207ENST00000620429 PXDNQ92626 1479 aa12□□□□□ -0.49
VPS11-207ENST00000620429 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
VPS11-207ENST00000620429 ERLIN2O94905 339 aa12□□□□□ -0.49
VPS11-207ENST00000620429 PSME1Q06323 249 aa12□□□□□ -0.49
VPS11-207ENST00000620429 KCNV1Q6PIU1 500 aa12□□□□□ -0.49
VPS11-207ENST00000620429 GIMAP7Q8NHV1 300 aa12□□□□□ -0.49
VPS11-207ENST00000620429 KAT2BQ92831 832 aa12□□□□□ -0.49
VPS11-207ENST00000620429 PPP1R13BQ96KQ4 1090 aa12□□□□□ -0.49
VPS11-207ENST00000620429 FAM210AQ96ND0 272 aa12□□□□□ -0.49
VPS11-207ENST00000620429 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
VPS11-207ENST00000620429 NBPF3Q9H094 633 aa12□□□□□ -0.49
VPS11-207ENST00000620429 TTC41PQ6P2S7 1318 aa12□□□□□ -0.49
VPS11-207ENST00000620429 HSPA4P34932 840 aa12□□□□□ -0.49
VPS11-207ENST00000620429 IL25Q9H293 177 aa12□□□□□ -0.49
VPS11-207ENST00000620429 STX6O43752 255 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 GSDMDP57764 484 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
VPS11-207ENST00000620429 CWC27Q6UX04 472 aaKnown RBP11.99□□□□□ -0.49
VPS11-207ENST00000620429 GBP6Q6ZN66 633 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 FMNL3Q8IVF7 1028 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 IL17REQ8NFR9 667 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 SYT1P21579 422 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 ELF1P32519 619 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 ZNF165P49910 485 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
VPS11-207ENST00000620429 JAKMIP3Q5VZ66 844 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 VPS18Q9P253 973 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 STAP2Q9UGK3 403 aa11.99□□□□□ -0.49
VPS11-207ENST00000620429 TUBGCP6Q96RT7 1819 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 SRGAP3O43295 1099 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 GNAI3P08754 354 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 ATP8B2P98198 1209 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 SETQ01105 290 aaPredicted RBP11.98□□□□□ -0.49
VPS11-207ENST00000620429 DDR1Q08345 913 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 NEDD9Q14511 834 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
VPS11-207ENST00000620429 IL1RAPL2Q9NP60 686 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 DNAI1Q9UI46 699 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 SMC3Q9UQE7 1217 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 MAP4K4O95819 1239 aaPredicted RBP11.98□□□□□ -0.49
VPS11-207ENST00000620429 EVCP57679 992 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 ETF1P62495 437 aaKnown RBP11.98□□□□□ -0.49
VPS11-207ENST00000620429 APOBRQ0VD83 1088 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
VPS11-207ENST00000620429 ZC3H12AQ5D1E8 599 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms