RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 HSP90AB3PQ58FF7 597 aa22.71■■□□□ 1.23
PCDHGB3-202ENST00000618934 FAM89AQ96GI7 184 aa22.71■■□□□ 1.23
PCDHGB3-202ENST00000618934 AGXT2Q9BYV1 514 aa22.71■■□□□ 1.23
PCDHGB3-202ENST00000618934 GUCY1B3Q02153 619 aa22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 RBM43Q6ZSC3 357 aaKnown RBP22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 PYCARDQ9ULZ3 195 aa22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 XIRP1Q702N8 1843 aaKnown RBP22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 CIAO1O76071 339 aa22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 HMGB1P09429 215 aaKnown RBP22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 SASS6Q6UVJ0 657 aa22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 KLHL34Q8N239 644 aa22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 CEP126Q9P2H0 1117 aa22.7■■□□□ 1.22
PCDHGB3-202ENST00000618934 PI16Q6UXB8 463 aa22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 DDX19AQ9NUU7 478 aaKnown RBP22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 SHANK3Q9BYB0 1731 aa22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 PAPPAQ13219 1627 aa22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 PDIA3P30101 505 aaKnown RBP22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 HAND2P61296 217 aa22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 TCIRG1Q13488 830 aa22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 XAGE2Q96GT9 111 aa22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 LLPHQ9BRT6 129 aaKnown RBP22.69■■□□□ 1.22
PCDHGB3-202ENST00000618934 DNTTIP2Q5QJE6 756 aaKnown RBP22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 ZSCAN16Q9H4T2 348 aaPredicted RBP22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 FAM13BQ9NYF5 915 aa22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 CCDC57Q2TAC2 916 aa22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 ATG3Q9NT62 314 aa22.68■■□□□ 1.22
PCDHGB3-202ENST00000618934 TNS2Q63HR2 1409 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 CARD10Q9BWT7 1032 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 DNAJC10Q8IXB1 793 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 USP28Q96RU2 1077 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 DNAJC25Q9H1X3 360 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 GOLPH3LQ9H4A5 285 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 SALL1Q9NSC2 1324 aa22.67■■□□□ 1.22
PCDHGB3-202ENST00000618934 NWD2Q9ULI1 1742 aa22.66■■□□□ 1.22
PCDHGB3-202ENST00000618934 MYH15Q9Y2K3 1946 aa22.66■■□□□ 1.22
PCDHGB3-202ENST00000618934 NAA16Q6N069 864 aaPredicted RBP22.66■■□□□ 1.22
PCDHGB3-202ENST00000618934 SPTLC3Q9NUV7 552 aa22.66■■□□□ 1.22
PCDHGB3-202ENST00000618934 TOGARAM1Q9Y4F4 1720 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 A0A087WWV3 80 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 FDPSP14324 419 aaKnown RBP22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 ZAP70P43403 619 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 WASHC4Q2M389 1173 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 GLIPR1L2Q4G1C9 344 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 TTC39AQ5SRH9 613 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 GORABQ5T7V8 394 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 PTGS1P23219 599 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 KIAA1524Q8TCG1 905 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 TSC1Q92574 1164 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 PUS7LQ9H0K6 701 aaKnown RBP22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 RCOR1Q9UKL0 485 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 CFAP45Q9UL16 551 aa22.65■■□□□ 1.22
PCDHGB3-202ENST00000618934 OTUD7BQ6GQQ9 843 aa22.64■■□□□ 1.21
PCDHGB3-202ENST00000618934 NRBP1Q9UHY1 535 aa22.64■■□□□ 1.21
PCDHGB3-202ENST00000618934 RAB11FIP4Q86YS3 637 aa22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 SOS2Q07890 1332 aaPredicted RBP22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 FGAP02671 866 aa22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 HLFQ16534 295 aa22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 CCDC158Q5M9N0 1113 aa22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 CCAR1Q8IX12 1150 aaKnown RBP22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 PIGBQ92521 554 aa22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 TMOD3Q9NYL9 352 aa22.63■■□□□ 1.21
PCDHGB3-202ENST00000618934 GPTP24298 496 aa22.62■■□□□ 1.21
PCDHGB3-202ENST00000618934 HMGN5P82970 282 aaKnown RBP22.62■■□□□ 1.21
PCDHGB3-202ENST00000618934 ZNF274Q96GC6 653 aaPredicted RBP22.62■■□□□ 1.21
PCDHGB3-202ENST00000618934 ZNF165P49910 485 aa22.62■■□□□ 1.21
PCDHGB3-202ENST00000618934 NKX2-3Q8TAU0 364 aa22.62■■□□□ 1.21
PCDHGB3-202ENST00000618934 CSF1RP07333 972 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 EVA1CP58658 441 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 SNW1Q13573 536 aaKnown RBP22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 DENND2AQ9ULE3 1009 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 PCCAP05165 728 aaPredicted RBP22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 PDCL3Q9H2J4 239 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 GJB4Q9NTQ9 266 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 CARMIL3Q8ND23 1372 aa22.61■■□□□ 1.21
PCDHGB3-202ENST00000618934 SPEF2Q9C093 1822 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 C11orf57Q6ZUT1 292 aaPredicted RBP22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 TDRD7Q8NHU6 1098 aaKnown RBP22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 ERCC4Q92889 916 aaPredicted RBP22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 KAT6BQ8WYB5 2073 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 DYNC1I1O14576 645 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 LRMPQ12912 555 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 TRIM28Q13263 835 aaKnown RBP22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 TAF7LQ5H9L4 462 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 CCDC186Q7Z3E2 898 aa22.6■■□□□ 1.21
PCDHGB3-202ENST00000618934 ZNF75DP51815 510 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 ANTXR2P58335 489 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 IFIT5Q13325 482 aaKnown RBP22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 PLA2G4DQ86XP0 818 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 ZBTB38Q8NAP3 1195 aaPredicted RBP22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 MYRIPQ8NFW9 859 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 AKAP2Q9Y2D5 859 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 TRIM5Q9C035 493 aa22.59■■□□□ 1.21
PCDHGB3-202ENST00000618934 GREM2Q9H772 168 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms