RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSX3-204ENST00000612497 WNT10BO00744 389 aa13.51□□□□□ -0.25
SSX3-204ENST00000612497 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
SSX3-204ENST00000612497 CUL9Q8IWT3 2517 aa13.51□□□□□ -0.25
SSX3-204ENST00000612497 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
SSX3-204ENST00000612497 MYCP01106 439 aaPredicted RBP13.5□□□□□ -0.25
SSX3-204ENST00000612497 SP3Q02447 781 aa13.5□□□□□ -0.25
SSX3-204ENST00000612497 CRHR2Q13324 411 aa13.5□□□□□ -0.25
SSX3-204ENST00000612497 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
SSX3-204ENST00000612497 FZD1Q9UP38 647 aa13.5□□□□□ -0.25
SSX3-204ENST00000612497 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
SSX3-204ENST00000612497 SASH1O94885 1247 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
SSX3-204ENST00000612497 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 SLC9C1Q4G0N8 1177 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 PODNQ7Z5L7 613 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 APOBEC3FQ8IUX4 373 aaKnown RBP13.49□□□□□ -0.25
SSX3-204ENST00000612497 FBXW7Q969H0 707 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 SEC31BQ9NQW1 1179 aa13.49□□□□□ -0.25
SSX3-204ENST00000612497 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
SSX3-204ENST00000612497 RANBP2P49792 3224 aaKnown RBP13.49□□□□□ -0.25
SSX3-204ENST00000612497 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
SSX3-204ENST00000612497 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
SSX3-204ENST00000612497 PCGF6Q9BYE7 350 aa13.48□□□□□ -0.25
SSX3-204ENST00000612497 CAP1Q01518 475 aa13.47□□□□□ -0.25
SSX3-204ENST00000612497 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
SSX3-204ENST00000612497 DPF3Q92784 378 aa13.47□□□□□ -0.25
SSX3-204ENST00000612497 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
SSX3-204ENST00000612497 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
SSX3-204ENST00000612497 XDHP47989 1333 aa13.46□□□□□ -0.25
SSX3-204ENST00000612497 ATP2B4P23634 1241 aa13.46□□□□□ -0.25
SSX3-204ENST00000612497 ARHGEF6Q15052 776 aa13.46□□□□□ -0.25
SSX3-204ENST00000612497 DACT2Q5SW24 774 aa13.46□□□□□ -0.25
SSX3-204ENST00000612497 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
SSX3-204ENST00000612497 LAMB1P07942 1786 aa13.45□□□□□ -0.26
SSX3-204ENST00000612497 MYO3BQ8WXR4 1341 aa13.45□□□□□ -0.26
SSX3-204ENST00000612497 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
SSX3-204ENST00000612497 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
SSX3-204ENST00000612497 WTIPA6NIX2 430 aaPredicted RBP13.44□□□□□ -0.26
SSX3-204ENST00000612497 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
SSX3-204ENST00000612497 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
SSX3-204ENST00000612497 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
SSX3-204ENST00000612497 DEFB129Q9H1M3 183 aa13.44□□□□□ -0.26
SSX3-204ENST00000612497 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
SSX3-204ENST00000612497 MAPK8IP3Q9UPT6 1336 aa13.43□□□□□ -0.26
SSX3-204ENST00000612497 HSP90B1P14625 803 aaKnown RBP13.43□□□□□ -0.26
SSX3-204ENST00000612497 MMP14P50281 582 aa13.43□□□□□ -0.26
SSX3-204ENST00000612497 STRIP1Q5VSL9 837 aa13.43□□□□□ -0.26
SSX3-204ENST00000612497 KIAA0825Q8IV33 1275 aa13.43□□□□□ -0.26
SSX3-204ENST00000612497 ANKRD18AQ8IVF6 992 aa13.43□□□□□ -0.26
SSX3-204ENST00000612497 PTPN18Q99952 460 aa13.43□□□□□ -0.26
SSX3-204ENST00000612497 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
SSX3-204ENST00000612497 COL1A1P02452 1464 aaPredicted RBP13.42□□□□□ -0.26
SSX3-204ENST00000612497 GJA5P36382 358 aa13.42□□□□□ -0.26
SSX3-204ENST00000612497 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
SSX3-204ENST00000612497 ZBTB38Q8NAP3 1195 aaPredicted RBP13.42□□□□□ -0.26
SSX3-204ENST00000612497 SH3TC2Q8TF17 1288 aa13.42□□□□□ -0.26
SSX3-204ENST00000612497 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
SSX3-204ENST00000612497 UNCXA6NJT0 531 aa13.41□□□□□ -0.26
SSX3-204ENST00000612497 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
SSX3-204ENST00000612497 TRIM28Q13263 835 aaKnown RBP13.41□□□□□ -0.26
SSX3-204ENST00000612497 KRT24Q2M2I5 525 aa13.41□□□□□ -0.26
SSX3-204ENST00000612497 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
SSX3-204ENST00000612497 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
SSX3-204ENST00000612497 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
SSX3-204ENST00000612497 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
SSX3-204ENST00000612497 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
SSX3-204ENST00000612497 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
SSX3-204ENST00000612497 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
SSX3-204ENST00000612497 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
SSX3-204ENST00000612497 TTLL5Q6EMB2 1281 aa13.4□□□□□ -0.26
SSX3-204ENST00000612497 ZBED3Q96IU2 234 aaPredicted RBP13.4□□□□□ -0.26
SSX3-204ENST00000612497 COA1Q9GZY4 146 aa13.4□□□□□ -0.26
SSX3-204ENST00000612497 ZFYVE28Q9HCC9 887 aa13.4□□□□□ -0.26
SSX3-204ENST00000612497 SSC5DA1L4H1 1573 aa13.4□□□□□ -0.26
SSX3-204ENST00000612497 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 PDE8AO60658 829 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 RIPK4P57078 832 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 ANKRD13AQ8IZ07 590 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
SSX3-204ENST00000612497 HTATIP2Q9BUP3 242 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
SSX3-204ENST00000612497 PPP2R3BQ9Y5P8 575 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
SSX3-204ENST00000612497 USP2O75604 605 aaPredicted RBP13.38□□□□□ -0.27
SSX3-204ENST00000612497 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
SSX3-204ENST00000612497 KIF22Q14807 665 aa13.38□□□□□ -0.27
SSX3-204ENST00000612497 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
SSX3-204ENST00000612497 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
SSX3-204ENST00000612497 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
SSX3-204ENST00000612497 SHISA4Q96DD7 197 aa13.38□□□□□ -0.27
SSX3-204ENST00000612497 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
SSX3-204ENST00000612497 ELP3Q9H9T3 547 aa13.38□□□□□ -0.27
SSX3-204ENST00000612497 HYPKQ9NX55 129 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms