RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 STRIP1Q5VSL9 837 aa22.96■■□□□ 1.27
VCX3A-203ENST00000612369 LDHAL6AQ6ZMR3 332 aa22.96■■□□□ 1.27
VCX3A-203ENST00000612369 C15orf52Q6ZUT6 534 aaKnown RBP22.96■■□□□ 1.27
VCX3A-203ENST00000612369 TXNRD3Q86VQ6 643 aa22.96■■□□□ 1.27
VCX3A-203ENST00000612369 SUCLG2Q96I99 432 aa22.96■■□□□ 1.27
VCX3A-203ENST00000612369 MYO3BQ8WXR4 1341 aa22.96■■□□□ 1.27
VCX3A-203ENST00000612369 USP17L8P0C7I0 530 aa22.95■■□□□ 1.26
VCX3A-203ENST00000612369 MMP14P50281 582 aa22.95■■□□□ 1.26
VCX3A-203ENST00000612369 BRPF1P55201 1214 aaPredicted RBP22.95■■□□□ 1.26
VCX3A-203ENST00000612369 RBM26Q5T8P6 1007 aaKnown RBP22.95■■□□□ 1.26
VCX3A-203ENST00000612369 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
VCX3A-203ENST00000612369 DCPSQ96C86 337 aaKnown RBP22.95■■□□□ 1.26
VCX3A-203ENST00000612369 KAZALD1Q96I82 304 aa22.95■■□□□ 1.26
VCX3A-203ENST00000612369 EGFRP00533 1210 aa22.94■■□□□ 1.26
VCX3A-203ENST00000612369 HSPA1AP0DMV8 641 aaKnown RBP22.94■■□□□ 1.26
VCX3A-203ENST00000612369 HSPA1BP0DMV9 641 aaKnown RBP22.94■■□□□ 1.26
VCX3A-203ENST00000612369 RABL6Q3YEC7 729 aaPredicted RBP22.94■■□□□ 1.26
VCX3A-203ENST00000612369 DACT2Q5SW24 774 aa22.94■■□□□ 1.26
VCX3A-203ENST00000612369 CNNM1Q9NRU3 951 aa22.94■■□□□ 1.26
VCX3A-203ENST00000612369 TLL2Q9Y6L7 1015 aa22.94■■□□□ 1.26
VCX3A-203ENST00000612369 CELF2O95319 508 aaKnown RBP22.93■■□□□ 1.26
VCX3A-203ENST00000612369 ZNF594Q96JF6 807 aaPredicted RBP22.93■■□□□ 1.26
VCX3A-203ENST00000612369 TAF5LO75529 589 aa22.92■■□□□ 1.26
VCX3A-203ENST00000612369 KRT26Q7Z3Y9 468 aa22.92■■□□□ 1.26
VCX3A-203ENST00000612369 USP48Q86UV5 1035 aa22.92■■□□□ 1.26
VCX3A-203ENST00000612369 IRS2Q9Y4H2 1338 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 KLRK1P26718 216 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 ECE1P42892 770 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 TTLL5Q6EMB2 1281 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 OGFOD1Q8N543 542 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 HELBQ8NG08 1087 aaPredicted RBP22.91■■□□□ 1.26
VCX3A-203ENST00000612369 USP44Q9H0E7 712 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 BICC1Q9H694 974 aaKnown RBP22.91■■□□□ 1.26
VCX3A-203ENST00000612369 CD209Q9NNX6 404 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 MYOZ2Q9NPC6 264 aa22.91■■□□□ 1.26
VCX3A-203ENST00000612369 WDR33Q9C0J8 1336 aaKnown RBP22.9■■□□□ 1.26
VCX3A-203ENST00000612369 ZNF804AQ7Z570 1209 aa22.9■■□□□ 1.26
VCX3A-203ENST00000612369 SAPCD2Q86UD0 394 aa22.9■■□□□ 1.26
VCX3A-203ENST00000612369 MIER1Q8N108 512 aa22.9■■□□□ 1.26
VCX3A-203ENST00000612369 HHIPL1Q96JK4 782 aa22.9■■□□□ 1.26
VCX3A-203ENST00000612369 A0A1B0GUL6 1792 aa22.9■■□□□ 1.26
VCX3A-203ENST00000612369 SCARF1Q14162 830 aa22.89■■□□□ 1.25
VCX3A-203ENST00000612369 SULF1Q8IWU6 871 aa22.89■■□□□ 1.25
VCX3A-203ENST00000612369 FBXW7Q969H0 707 aa22.89■■□□□ 1.25
VCX3A-203ENST00000612369 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.25
VCX3A-203ENST00000612369 POLR2AP24928 1970 aaKnown RBP22.89■■□□□ 1.25
VCX3A-203ENST00000612369 ZNF646O15015 1829 aaPredicted RBP22.88■■□□□ 1.25
VCX3A-203ENST00000612369 SNAP23O00161 211 aa22.88■■□□□ 1.25
VCX3A-203ENST00000612369 UBE4AQ14139 1066 aa22.88■■□□□ 1.25
VCX3A-203ENST00000612369 ANKRD44Q8N8A2 993 aa22.88■■□□□ 1.25
VCX3A-203ENST00000612369 ZNF408Q9H9D4 720 aa22.88■■□□□ 1.25
VCX3A-203ENST00000612369 GGA3Q9NZ52 723 aa22.88■■□□□ 1.25
VCX3A-203ENST00000612369 NOB1Q9ULX3 412 aaKnown RBP22.88■■□□□ 1.25
VCX3A-203ENST00000612369 MROH5Q6ZUA9 1318 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 PITPNM2Q9BZ72 1349 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 PLIN1O60240 522 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 IL1R1P14778 569 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 RARSP54136 660 aaKnown RBP22.87■■□□□ 1.25
VCX3A-203ENST00000612369 GTF2IP78347 998 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 PAXIP1Q6ZW49 1069 aaPredicted RBP22.87■■□□□ 1.25
VCX3A-203ENST00000612369 CAPNS2Q96L46 248 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 RIPOR2Q9Y4F9 1068 aa22.87■■□□□ 1.25
VCX3A-203ENST00000612369 ARHGAP45Q92619 1136 aa22.86■■□□□ 1.25
VCX3A-203ENST00000612369 MXD3Q9BW11 206 aa22.86■■□□□ 1.25
VCX3A-203ENST00000612369 HDAC9Q9UKV0 1011 aa22.86■■□□□ 1.25
VCX3A-203ENST00000612369 KIF16BQ96L93 1317 aa22.85■■□□□ 1.25
VCX3A-203ENST00000612369 MAP2K1Q02750 393 aaPredicted RBP22.85■■□□□ 1.25
VCX3A-203ENST00000612369 ANGEL2Q5VTE6 544 aaKnown RBP22.85■■□□□ 1.25
VCX3A-203ENST00000612369 AIDAQ96BJ3 306 aa22.85■■□□□ 1.25
VCX3A-203ENST00000612369 PUS3Q9BZE2 481 aaKnown RBP22.85■■□□□ 1.25
VCX3A-203ENST00000612369 WBP1LQ9NX94 342 aa22.85■■□□□ 1.25
VCX3A-203ENST00000612369 HDAC5Q9UQL6 1122 aa22.85■■□□□ 1.25
VCX3A-203ENST00000612369 ADM5C9JUS6 153 aa22.84■■□□□ 1.25
VCX3A-203ENST00000612369 FKBP1AP62942 108 aaKnown RBP22.84■■□□□ 1.25
VCX3A-203ENST00000612369 IFFO2Q5TF58 517 aa22.84■■□□□ 1.25
VCX3A-203ENST00000612369 CYP4F22Q6NT55 531 aa22.84■■□□□ 1.25
VCX3A-203ENST00000612369 ASTN2O75129 1339 aaPredicted RBP22.83■■□□□ 1.25
VCX3A-203ENST00000612369 MAP2K2P36507 400 aa22.83■■□□□ 1.25
VCX3A-203ENST00000612369 C2orf69Q8N8R5 385 aa22.83■■□□□ 1.25
VCX3A-203ENST00000612369 UBTFL1P0CB47 393 aaPredicted RBP22.82■■□□□ 1.24
VCX3A-203ENST00000612369 DLK2Q6UY11 383 aa22.82■■□□□ 1.24
VCX3A-203ENST00000612369 KIAA0825Q8IV33 1275 aa22.82■■□□□ 1.24
VCX3A-203ENST00000612369 GBA2Q9HCG7 927 aaPredicted RBP22.82■■□□□ 1.24
VCX3A-203ENST00000612369 THSD7BQ9C0I4 1608 aa22.82■■□□□ 1.24
VCX3A-203ENST00000612369 WNT10BO00744 389 aa22.81■■□□□ 1.24
VCX3A-203ENST00000612369 SASH1O94885 1247 aa22.81■■□□□ 1.24
VCX3A-203ENST00000612369 HUNKP57058 714 aa22.81■■□□□ 1.24
VCX3A-203ENST00000612369 NBPF9Q3BBW0 867 aa22.81■■□□□ 1.24
VCX3A-203ENST00000612369 COL13A1Q5TAT6 717 aaPredicted RBP22.81■■□□□ 1.24
VCX3A-203ENST00000612369 FOXN1O15353 648 aa22.8■■□□□ 1.24
VCX3A-203ENST00000612369 IPO8O15397 1037 aaKnown RBP22.8■■□□□ 1.24
VCX3A-203ENST00000612369 HIBADHP31937 336 aaKnown RBP22.8■■□□□ 1.24
VCX3A-203ENST00000612369 CTCFP49711 727 aaPredicted RBP22.8■■□□□ 1.24
VCX3A-203ENST00000612369 HNRNPUQ00839 825 aaKnown RBP eCLIP22.8■■□□□ 1.24
VCX3A-203ENST00000612369 GRM1Q13255 1194 aa22.8■■□□□ 1.24
VCX3A-203ENST00000612369 LRRC24Q50LG9 513 aa22.8■■□□□ 1.24
VCX3A-203ENST00000612369 METTL24Q5JXM2 366 aa22.8■■□□□ 1.24
VCX3A-203ENST00000612369 CDCA5Q96FF9 252 aa22.8■■□□□ 1.24
VCX3A-203ENST00000612369 FAM84BQ96KN1 310 aaPredicted RBP22.8■■□□□ 1.24
VCX3A-203ENST00000612369 PDE8BO95263 885 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms