RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 MAGEB6Q8N7X4 407 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 ZNF397Q8NF99 534 aaPredicted RBP9.89□□□□□ -0.83
TMCO1-208ENST00000612311 PYM1Q9BRP8 204 aaKnown RBP9.89□□□□□ -0.83
TMCO1-208ENST00000612311 ABCC3O15438 1527 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 KIF5CO60282 957 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 NOLC1Q14978 699 aaKnown RBP eCLIP9.89□□□□□ -0.83
TMCO1-208ENST00000612311 KIF4BQ2VIQ3 1234 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 HS1BP3Q53T59 392 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 FAM173BQ6P4H8 233 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 SH3TC1Q8TE82 1336 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 USP6P35125 1406 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 HECW2Q9P2P5 1572 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 SHROOM2Q13796 1616 aa9.89□□□□□ -0.83
TMCO1-208ENST00000612311 AXDND1Q5T1B0 1012 aaPredicted RBP9.88□□□□□ -0.83
TMCO1-208ENST00000612311 DNAJC10Q8IXB1 793 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 MIGA1Q8NAN2 632 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 TRPM1Q7Z4N2 1603 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 APPBP2Q92624 585 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 EAF2Q96CJ1 260 aaPredicted RBP9.88□□□□□ -0.83
TMCO1-208ENST00000612311 TM6SF1Q9BZW5 370 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 RBSNQ9H1K0 784 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 NDUFB9Q9Y6M9 179 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 ARAP3Q8WWN8 1544 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 IBTKQ9P2D0 1353 aaPredicted RBP9.88□□□□□ -0.83
TMCO1-208ENST00000612311 MAGEB6P1A0A0J9YX57 407 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 ITGA6P23229 1130 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 BRAPQ7Z569 592 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 AOPEPQ8N6M6 819 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 CCDC150Q8NCX0 1101 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 PRIMPOLQ96LW4 560 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 MYO6Q9UM54 1294 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 ARHGAP31Q2M1Z3 1444 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 CCDC66A2RUB6 948 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 TOM1O60784 492 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 EIF3JO75822 258 aaKnown RBP9.88□□□□□ -0.83
TMCO1-208ENST00000612311 IDEP14735 1019 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 UBASH3AP57075 661 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 TMCO3Q6UWJ1 677 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 XAGE2Q96GT9 111 aa9.88□□□□□ -0.83
TMCO1-208ENST00000612311 PHKG2P15735 406 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 ATP5JP18859 108 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 RXRAP19793 462 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 GNAQP50148 359 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 GSTO1P78417 241 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 SETQ01105 290 aaPredicted RBP9.87□□□□□ -0.83
TMCO1-208ENST00000612311 NUP88Q99567 741 aaPredicted RBP9.87□□□□□ -0.83
TMCO1-208ENST00000612311 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
TMCO1-208ENST00000612311 PDCL3Q9H2J4 239 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 LMBRD1Q9NUN5 540 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 TRIM75PA6NK02 468 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 BRD1O95696 1058 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 SKILP12757 684 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 ZNF445P59923 1031 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 SPA17Q15506 151 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 ATL3Q6DD88 541 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 EDC3Q96F86 508 aaKnown RBP9.87□□□□□ -0.83
TMCO1-208ENST00000612311 DTNBO60941 627 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 MBD4O95243 580 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 FGFR1OPO95684 399 aaKnown RBP9.87□□□□□ -0.83
TMCO1-208ENST00000612311 SNW1Q13573 536 aaKnown RBP9.87□□□□□ -0.83
TMCO1-208ENST00000612311 CALML4Q96GE6 196 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 TSG101Q99816 390 aa9.87□□□□□ -0.83
TMCO1-208ENST00000612311 YEATS4O95619 227 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 IQCEQ6IPM2 695 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 CACNA2D4Q7Z3S7 1137 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 LLPHQ9BRT6 129 aaKnown RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 CLTCL1P53675 1640 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 PDE8AO60658 829 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 TSPY3P0CV98 308 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 TSPY8P0CW00 308 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 LMOD1P29536 600 aaPredicted RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 AFMP43652 599 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 AMPD3Q01432 767 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 ARHGEF25Q86VW2 580 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 SIRT2Q8IXJ6 389 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 CCDC148Q8NFR7 591 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 CWC15Q9P013 229 aaKnown RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 GPAA1O43292 621 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 MTIF2P46199 727 aaKnown RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 TMEM132AQ24JP5 1023 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 CCDC178Q5BJE1 867 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 NYXQ9GZU5 481 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 SSH2Q76I76 1423 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 UNC13BO14795 1591 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 KDRP35968 1356 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 N4BP3O15049 544 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 CASQ1P31415 396 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 PARP10Q53GL7 1025 aa9.86□□□□□ -0.83
TMCO1-208ENST00000612311 NCOA5Q9HCD5 579 aaKnown RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 ZNF219Q9P2Y4 722 aaPredicted RBP9.86□□□□□ -0.83
TMCO1-208ENST00000612311 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
TMCO1-208ENST00000612311 GOLGA6L9A6NEM1 432 aa9.85□□□□□ -0.83
TMCO1-208ENST00000612311 B4E1Z4 1266 aa9.85□□□□□ -0.83
TMCO1-208ENST00000612311 DYNC1I1O14576 645 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms