RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 FRAT1Q92837 279 aaPredicted RBP24.07■■□□□ 1.44
SRSF4-206ENST00000605204 PSMD14O00487 310 aa24.06■■□□□ 1.44
SRSF4-206ENST00000605204 FMR1Q06787 632 aaKnown RBP eCLIP24.06■■□□□ 1.444e-8■□□□□ 10.3
SRSF4-206ENST00000605204 CNTROBQ8N137 903 aa24.06■■□□□ 1.44
SRSF4-206ENST00000605204 MROH5Q6ZUA9 1318 aa24.06■■□□□ 1.44
SRSF4-206ENST00000605204 SPEF2Q9C093 1822 aa24.05■■□□□ 1.44
SRSF4-206ENST00000605204 VIL1P09327 827 aaKnown RBP24.05■■□□□ 1.44
SRSF4-206ENST00000605204 EPS15P42566 896 aa24.05■■□□□ 1.44
SRSF4-206ENST00000605204 H7C1D1 291 aa24.04■■□□□ 1.44
SRSF4-206ENST00000605204 RASSF10A6NK89 507 aa24.03■■□□□ 1.44
SRSF4-206ENST00000605204 AGBL3Q8NEM8 1001 aa24.03■■□□□ 1.44
SRSF4-206ENST00000605204 ZNF594Q96JF6 807 aaPredicted RBP24.03■■□□□ 1.44
SRSF4-206ENST00000605204 USP17L3A6NCW0 530 aa24.03■■□□□ 1.44
SRSF4-206ENST00000605204 USP17L4A6NCW7 530 aa24.03■■□□□ 1.44
SRSF4-206ENST00000605204 USP17L1Q7RTZ2 530 aa24.03■■□□□ 1.44
SRSF4-206ENST00000605204 FBXO3Q9UK99 471 aa24.03■■□□□ 1.44
SRSF4-206ENST00000605204 MYO3BQ8WXR4 1341 aa24.02■■□□□ 1.44
SRSF4-206ENST00000605204 MMP14P50281 582 aa24.02■■□□□ 1.44
SRSF4-206ENST00000605204 UBE4AQ14139 1066 aa24.02■■□□□ 1.44
SRSF4-206ENST00000605204 ZC3H15Q8WU90 426 aaKnown RBP24.02■■□□□ 1.44
SRSF4-206ENST00000605204 CNOT7Q9UIV1 285 aaKnown RBP24.02■■□□□ 1.44
SRSF4-206ENST00000605204 STRIP1Q5VSL9 837 aa24.01■■□□□ 1.43
SRSF4-206ENST00000605204 RSBN1LQ6PCB5 846 aaPredicted RBP24.01■■□□□ 1.43
SRSF4-206ENST00000605204 ZNF804AQ7Z570 1209 aa24.01■■□□□ 1.43
SRSF4-206ENST00000605204 MICALL2Q8IY33 904 aa24.01■■□□□ 1.43
SRSF4-206ENST00000605204 FTSJ3Q8IY81 847 aaKnown RBP24.01■■□□□ 1.43
SRSF4-206ENST00000605204 MEIS3Q99687 375 aa24.01■■□□□ 1.43
SRSF4-206ENST00000605204 RIPOR2Q9Y4F9 1068 aa24.01■■□□□ 1.43
SRSF4-206ENST00000605204 TAF5LO75529 589 aa24■■□□□ 1.43
SRSF4-206ENST00000605204 ZBTB12Q9Y330 459 aaPredicted RBP24■■□□□ 1.43
SRSF4-206ENST00000605204 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
SRSF4-206ENST00000605204 TRAF5O00463 557 aa23.99■■□□□ 1.43
SRSF4-206ENST00000605204 HELBQ8NG08 1087 aaPredicted RBP23.99■■□□□ 1.43
SRSF4-206ENST00000605204 WBP1LQ9NX94 342 aa23.99■■□□□ 1.43
SRSF4-206ENST00000605204 LRRFIP2Q9Y608 721 aaKnown RBP23.99■■□□□ 1.43
SRSF4-206ENST00000605204 IRS2Q9Y4H2 1338 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 MS4A1P11836 297 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 METTL24Q5JXM2 366 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 TXNRD3Q86VQ6 643 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 CLUAP1Q96AJ1 413 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 KCNQ5Q9NR82 932 aa23.98■■□□□ 1.43
SRSF4-206ENST00000605204 ABT1Q9ULW3 272 aaKnown RBP23.98■■□□□ 1.43
SRSF4-206ENST00000605204 CTCFP49711 727 aaPredicted RBP23.97■■□□□ 1.43
SRSF4-206ENST00000605204 DZIP1LQ8IYY4 767 aaKnown RBP23.97■■□□□ 1.43
SRSF4-206ENST00000605204 AIDAQ96BJ3 306 aa23.97■■□□□ 1.43
SRSF4-206ENST00000605204 CD209Q9NNX6 404 aa23.97■■□□□ 1.43
SRSF4-206ENST00000605204 EYA2O00167 538 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 CIAO1O76071 339 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 GNAI2P04899 355 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 KLRK1P26718 216 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 RFX5P48382 616 aaPredicted RBP23.96■■□□□ 1.43
SRSF4-206ENST00000605204 MTX1Q13505 466 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 DACT2Q5SW24 774 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 PUS3Q9BZE2 481 aaKnown RBP23.96■■□□□ 1.43
SRSF4-206ENST00000605204 PGAP2Q9UHJ9 254 aa23.96■■□□□ 1.43
SRSF4-206ENST00000605204 WDR33Q9C0J8 1336 aaKnown RBP23.96■■□□□ 1.43
SRSF4-206ENST00000605204 PLIN1O60240 522 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 PDE8BO95263 885 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 HSPA8P11142 646 aaKnown RBP23.95■■□□□ 1.42
SRSF4-206ENST00000605204 LBX1P52954 281 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 ZNF280AP59817 542 aaPredicted RBP23.95■■□□□ 1.42
SRSF4-206ENST00000605204 PTPN12Q05209 780 aaKnown RBP23.95■■□□□ 1.42
SRSF4-206ENST00000605204 DEFB115Q30KQ5 88 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 TMEM57Q8N5G2 664 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 GMLQ99445 158 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 A0A1B0GUL6 1792 aa23.95■■□□□ 1.42
SRSF4-206ENST00000605204 USP17L8P0C7I0 530 aa23.94■■□□□ 1.42
SRSF4-206ENST00000605204 IL1R1P14778 569 aa23.94■■□□□ 1.42
SRSF4-206ENST00000605204 VGLL2Q8N8G2 317 aa23.94■■□□□ 1.42
SRSF4-206ENST00000605204 SCN9AQ15858 1988 aa23.94■■□□□ 1.42
SRSF4-206ENST00000605204 PSME4Q14997 1843 aa23.94■■□□□ 1.42
SRSF4-206ENST00000605204 PUM3Q15397 648 aaKnown RBP23.93■■□□□ 1.42
SRSF4-206ENST00000605204 LRRC24Q50LG9 513 aa23.93■■□□□ 1.42
SRSF4-206ENST00000605204 TTLL5Q6EMB2 1281 aa23.93■■□□□ 1.42
SRSF4-206ENST00000605204 OGFOD1Q8N543 542 aa23.93■■□□□ 1.42
SRSF4-206ENST00000605204 TRPM4Q8TD43 1214 aa23.93■■□□□ 1.42
SRSF4-206ENST00000605204 COPRSQ9NQ92 184 aa23.93■■□□□ 1.42
SRSF4-206ENST00000605204 SNAP23O00161 211 aa23.92■■□□□ 1.42
SRSF4-206ENST00000605204 KIF4BQ2VIQ3 1234 aa23.92■■□□□ 1.42
SRSF4-206ENST00000605204 CST9Q5W186 159 aa23.92■■□□□ 1.42
SRSF4-206ENST00000605204 KLHDC4Q8TBB5 520 aa23.92■■□□□ 1.42
SRSF4-206ENST00000605204 SHTN1A0MZ66 631 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 FKBP1AP62942 108 aaKnown RBP23.91■■□□□ 1.42
SRSF4-206ENST00000605204 CAVIN4Q5BKX8 364 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 FBXW7Q969H0 707 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 SRGAP3O43295 1099 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 IFIT1P09914 478 aaKnown RBP23.91■■□□□ 1.42
SRSF4-206ENST00000605204 HIBADHP31937 336 aaKnown RBP23.91■■□□□ 1.42
SRSF4-206ENST00000605204 IL15P40933 162 aaPredicted RBP23.91■■□□□ 1.42
SRSF4-206ENST00000605204 HIRAP54198 1017 aaPredicted RBP23.91■■□□□ 1.42
SRSF4-206ENST00000605204 GTF2IP78347 998 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 CYP4F22Q6NT55 531 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 CAPNS2Q96L46 248 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 TNNQ9UQP3 1299 aa23.91■■□□□ 1.42
SRSF4-206ENST00000605204 TBC1D10BQ4KMP7 808 aaPredicted RBP23.9■■□□□ 1.42
SRSF4-206ENST00000605204 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
SRSF4-206ENST00000605204 SAMD7Q7Z3H4 446 aa23.9■■□□□ 1.42
SRSF4-206ENST00000605204 VPS37DQ86XT2 251 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms