RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ANKRD44Q8N8A2 993 aa14.45□□□□□ -0.1
CCDC12-209ENST00000604164 ZNF594Q96JF6 807 aaPredicted RBP14.45□□□□□ -0.1
CCDC12-209ENST00000604164 TMEM88BA6NKF7 163 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 PLIN1O60240 522 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 TAF5LO75529 589 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 BCAR3O75815 825 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 OGFOD1Q8N543 542 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
CCDC12-209ENST00000604164 KCNQ5Q9NR82 932 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 PGAP2Q9UHJ9 254 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
CCDC12-209ENST00000604164 USP17L8P0C7I0 530 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 TRIM27P14373 513 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 METTL24Q5JXM2 366 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 TTLL5Q6EMB2 1281 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 DNAJC5GQ8N7S2 189 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 FBXW7Q969H0 707 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 KLRG1Q96E93 195 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 CD209Q9NNX6 404 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 RIPOR2Q9Y4F9 1068 aa14.43□□□□□ -0.1
CCDC12-209ENST00000604164 WTIPA6NIX2 430 aaPredicted RBP14.42□□□□□ -0.1
CCDC12-209ENST00000604164 ZNF280AP59817 542 aaPredicted RBP14.42□□□□□ -0.1
CCDC12-209ENST00000604164 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
CCDC12-209ENST00000604164 CDC37L1Q7L3B6 337 aa14.42□□□□□ -0.1
CCDC12-209ENST00000604164 TXNRD3Q86VQ6 643 aa14.42□□□□□ -0.1
CCDC12-209ENST00000604164 FTSJ3Q8IY81 847 aaKnown RBP14.42□□□□□ -0.1
CCDC12-209ENST00000604164 DCPSQ96C86 337 aaKnown RBP14.42□□□□□ -0.1
CCDC12-209ENST00000604164 HDAC9Q9UKV0 1011 aa14.42□□□□□ -0.1
CCDC12-209ENST00000604164 TBC1D10BQ4KMP7 808 aaPredicted RBP14.41□□□□□ -0.1
CCDC12-209ENST00000604164 CAVIN4Q5BKX8 364 aa14.41□□□□□ -0.1
CCDC12-209ENST00000604164 DACT2Q5SW24 774 aa14.41□□□□□ -0.1
CCDC12-209ENST00000604164 SAMD7Q7Z3H4 446 aa14.41□□□□□ -0.1
CCDC12-209ENST00000604164 VPS37DQ86XT2 251 aa14.41□□□□□ -0.1
CCDC12-209ENST00000604164 TRPM4Q8TD43 1214 aa14.41□□□□□ -0.1
CCDC12-209ENST00000604164 GMLQ99445 158 aa14.41□□□□□ -0.1
CCDC12-209ENST00000604164 LRRFIP2Q9Y608 721 aaKnown RBP14.41□□□□□ -0.1
CCDC12-209ENST00000604164 EYA2O00167 538 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 PDE8BO95263 885 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 MS4A1P11836 297 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 IL1R1P14778 569 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 KLRK1P26718 216 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 HIBADHP31937 336 aaKnown RBP14.4□□□□□ -0.1
CCDC12-209ENST00000604164 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
CCDC12-209ENST00000604164 FKBP1AP62942 108 aaKnown RBP14.4□□□□□ -0.1
CCDC12-209ENST00000604164 GTF2IP78347 998 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 HTRA3P83110 453 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
CCDC12-209ENST00000604164 MEIS3Q99687 375 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
CCDC12-209ENST00000604164 MYOZ2Q9NPC6 264 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 SCN9AQ15858 1988 aa14.4□□□□□ -0.1
CCDC12-209ENST00000604164 PSME4Q14997 1843 aa14.39□□□□□ -0.11
CCDC12-209ENST00000604164 CIAO1O76071 339 aa14.39□□□□□ -0.11
CCDC12-209ENST00000604164 GNAI2P04899 355 aa14.39□□□□□ -0.11
CCDC12-209ENST00000604164 IFIT1P09914 478 aaKnown RBP14.39□□□□□ -0.11
CCDC12-209ENST00000604164 PUM3Q15397 648 aaKnown RBP14.39□□□□□ -0.11
CCDC12-209ENST00000604164 LRRC24Q50LG9 513 aa14.39□□□□□ -0.11
CCDC12-209ENST00000604164 CLUAP1Q96AJ1 413 aa14.39□□□□□ -0.11
CCDC12-209ENST00000604164 IRS2Q9Y4H2 1338 aa14.39□□□□□ -0.11
CCDC12-209ENST00000604164 SHTN1A0MZ66 631 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 SNAP23O00161 211 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 SASH1O94885 1247 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 RFX5P48382 616 aaPredicted RBP14.38□□□□□ -0.11
CCDC12-209ENST00000604164 PTPN12Q05209 780 aaKnown RBP14.38□□□□□ -0.11
CCDC12-209ENST00000604164 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 DZIP1LQ8IYY4 767 aaKnown RBP14.38□□□□□ -0.11
CCDC12-209ENST00000604164 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 CEP126Q9P2H0 1117 aa14.38□□□□□ -0.11
CCDC12-209ENST00000604164 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
CCDC12-209ENST00000604164 FRAT2O75474 233 aaPredicted RBP14.37□□□□□ -0.11
CCDC12-209ENST00000604164 SLC5A1P13866 664 aa14.37□□□□□ -0.11
CCDC12-209ENST00000604164 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
CCDC12-209ENST00000604164 MTX1Q13505 466 aa14.37□□□□□ -0.11
CCDC12-209ENST00000604164 VGLL2Q8N8G2 317 aa14.37□□□□□ -0.11
CCDC12-209ENST00000604164 KLHDC4Q8TBB5 520 aa14.37□□□□□ -0.11
CCDC12-209ENST00000604164 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
CCDC12-209ENST00000604164 PITPNM2Q9BZ72 1349 aa14.37□□□□□ -0.11
CCDC12-209ENST00000604164 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 SRGAP3O43295 1099 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 CELF2O95319 508 aaKnown RBP14.36□□□□□ -0.11
CCDC12-209ENST00000604164 SCARF1Q14162 830 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 TMEM57Q8N5G2 664 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 TDRD7Q8NHU6 1098 aaKnown RBP14.36□□□□□ -0.11
CCDC12-209ENST00000604164 LPIN2Q92539 896 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 FAM84BQ96KN1 310 aaPredicted RBP14.36□□□□□ -0.11
CCDC12-209ENST00000604164 COPRSQ9NQ92 184 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 FAM205AQ6ZU69 1335 aa14.36□□□□□ -0.11
CCDC12-209ENST00000604164 RASSF10A6NK89 507 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 TRAF5O00463 557 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 EGFRP00533 1210 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 ECE1P42892 770 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 GYG1P46976 350 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 DEFB115Q30KQ5 88 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 FBXO33Q7Z6M2 555 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 USP48Q86UV5 1035 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 KIAA0825Q8IV33 1275 aa14.35□□□□□ -0.11
CCDC12-209ENST00000604164 ITPRIPQ8IWB1 547 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms