RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
RNF40-212ENST00000602784 TNIP1Q15025 636 aa17.19■□□□□ 0.34
RNF40-212ENST00000602784 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
RNF40-212ENST00000602784 GPC2Q8N158 579 aa17.19■□□□□ 0.34
RNF40-212ENST00000602784 LPIN2Q92539 896 aa17.19■□□□□ 0.34
RNF40-212ENST00000602784 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
RNF40-212ENST00000602784 KLRK1P26718 216 aa17.18■□□□□ 0.34
RNF40-212ENST00000602784 CXCL9Q07325 125 aa17.18■□□□□ 0.34
RNF40-212ENST00000602784 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
RNF40-212ENST00000602784 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
RNF40-212ENST00000602784 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
RNF40-212ENST00000602784 AKAP2Q9Y2D5 859 aa17.18■□□□□ 0.34
RNF40-212ENST00000602784 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
RNF40-212ENST00000602784 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
RNF40-212ENST00000602784 SLC5A1P13866 664 aa17.17■□□□□ 0.34
RNF40-212ENST00000602784 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
RNF40-212ENST00000602784 L3MBTL3Q96JM7 780 aaPredicted RBP17.17■□□□□ 0.34
RNF40-212ENST00000602784 FAM84BQ96KN1 310 aaPredicted RBP17.17■□□□□ 0.34
RNF40-212ENST00000602784 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
RNF40-212ENST00000602784 SASH1O94885 1247 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 IL1R1P14778 569 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 HIBADHP31937 336 aaKnown RBP17.16■□□□□ 0.34
RNF40-212ENST00000602784 TFCP2Q12800 502 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 OS9Q13438 667 aaPredicted RBP17.16■□□□□ 0.34
RNF40-212ENST00000602784 ATP2B3Q16720 1220 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 CAVIN4Q5BKX8 364 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 FBXO33Q7Z6M2 555 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
RNF40-212ENST00000602784 RAD17O75943 681 aa17.15■□□□□ 0.34
RNF40-212ENST00000602784 GPBP1L1Q9HC44 474 aaPredicted RBP17.15■□□□□ 0.34
RNF40-212ENST00000602784 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
RNF40-212ENST00000602784 WDR90Q96KV7 1748 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 USP17L3A6NCW0 530 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 USP17L4A6NCW7 530 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 ZBTB22O15209 634 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 VIL1P09327 827 aaKnown RBP17.14■□□□□ 0.33
RNF40-212ENST00000602784 USP17L1Q7RTZ2 530 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 TDRD7Q8NHU6 1098 aaKnown RBP17.14■□□□□ 0.33
RNF40-212ENST00000602784 KCNQ5Q9NR82 932 aa17.14■□□□□ 0.33
RNF40-212ENST00000602784 PSMD14O00487 310 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
RNF40-212ENST00000602784 RPS12P25398 132 aaKnown RBP17.13■□□□□ 0.33
RNF40-212ENST00000602784 GYG1P46976 350 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 STRIP1Q5VSL9 837 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 EXOC6BQ9Y2D4 811 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 GJA3Q9Y6H8 435 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 ZNF609O15014 1411 aa17.13■□□□□ 0.33
RNF40-212ENST00000602784 A0A1B0GUL7 405 aa17.12■□□□□ 0.33
RNF40-212ENST00000602784 IQCA1LA6NCM1 817 aa17.12■□□□□ 0.33
RNF40-212ENST00000602784 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
RNF40-212ENST00000602784 TIMM10P62072 90 aa17.12■□□□□ 0.33
RNF40-212ENST00000602784 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
RNF40-212ENST00000602784 DPF2Q92785 391 aa17.12■□□□□ 0.33
RNF40-212ENST00000602784 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
RNF40-212ENST00000602784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
RNF40-212ENST00000602784 PSME4Q14997 1843 aa17.12■□□□□ 0.33
RNF40-212ENST00000602784 POTECB2RU33 542 aa17.11■□□□□ 0.33
RNF40-212ENST00000602784 BCAMP50895 628 aa17.11■□□□□ 0.33
RNF40-212ENST00000602784 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
RNF40-212ENST00000602784 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
RNF40-212ENST00000602784 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
RNF40-212ENST00000602784 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
RNF40-212ENST00000602784 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
RNF40-212ENST00000602784 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
RNF40-212ENST00000602784 TNNI3KQ59H18 835 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 RSBN1LQ6PCB5 846 aaPredicted RBP17.1■□□□□ 0.33
RNF40-212ENST00000602784 AGBL3Q8NEM8 1001 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 XAGE2Q96GT9 111 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 RRAGCQ9HB90 399 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
RNF40-212ENST00000602784 FPGT-TNNI3KV9GXZ4 949 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 SCN4AP35499 1836 aa17.1■□□□□ 0.33
RNF40-212ENST00000602784 SEMA3EO15041 775 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 GMPSP49915 693 aaPredicted RBP17.09■□□□□ 0.33
RNF40-212ENST00000602784 MMP14P50281 582 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 SCNN1DP51172 638 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 GTF2IP78347 998 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 GMLQ99445 158 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 GPRC5DQ9NZD1 345 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 ARAP2Q8WZ64 1704 aa17.09■□□□□ 0.33
RNF40-212ENST00000602784 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
RNF40-212ENST00000602784 ADORA1P30542 326 aa17.08■□□□□ 0.32
RNF40-212ENST00000602784 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
RNF40-212ENST00000602784 KIF3CO14782 793 aa17.07■□□□□ 0.32
RNF40-212ENST00000602784 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
RNF40-212ENST00000602784 PHKA1P46020 1223 aa17.07■□□□□ 0.32
RNF40-212ENST00000602784 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
RNF40-212ENST00000602784 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
RNF40-212ENST00000602784 EAF2Q96CJ1 260 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms